Primulina tabacum: 142550927
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Entry
142550927 CDS
T11246
Name
(RefSeq) LOW QUALITY PROTEIN: histone deacetylase complex subunit SAP18-like
KO
K14324
histone deacetylase complex subunit SAP18
Organism
ptab Primulina tabacum
Pathway
ptab03013
Nucleocytoplasmic transport
ptab03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
142550927
03015 mRNA surveillance pathway
142550927
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptab03019
]
142550927
03036 Chromosome and associated proteins [BR:
ptab03036
]
142550927
Messenger RNA biogenesis [BR:
ptab03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
142550927
Chromosome and associated proteins [BR:
ptab03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
142550927
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAP18
Motif
Other DBs
NCBI-GeneID:
142550927
NCBI-ProteinID:
XP_075516089
LinkDB
All DBs
Position
7:complement(36685314..36687468)
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AA seq
156 aa
AA seq
DB search
MAEGQRRPGRPGPPPGRGPPPPPFANVVPRSEPVDREKTCPLLLRVFTKVGGHHADGDFA
VRGKEPKDEVQIYTWMDATLRELTDLVKEVAPEARRRDAILSFAFVYPDKRGRFVVREVG
RTFSYPNGRRPDSGSKALGELSFQIGDYLDVAILTQ
NT seq
471 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagggcaaagaagacctggaaggcctggccctccgccgggtaggggccctccg
ccgcctcctttcgccaacgtcgtccctcgatctgaacctgtggatcgcgagaagacttgt
ccattgttgcttcgtgttttcacaaaggttggaggccatcatgctgatggagattttgct
gtgagaggcaaggaaccaaaagatgaggttcagatttatacatggatggatgcaactttg
cgtgaattaactgatctggtgaaagaagtagctccggaagcaagaagaagagatgctatt
ctgtcttttgcttttgtctatcctgataagcgtggtcgttttgtggttagagaggtaggg
agaaccttttcttaccctaatggaaggcggcctgacagtggaagcaaagccttaggggaa
ctcagcttccagataggtgattacttggatgtcgcgatcctgacccagtaa
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integrated database retrieval system
