Primulina tabacum: 142551314
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Entry
142551314 CDS
T11246
Name
(RefSeq) nuclear pore complex protein NUP214
KO
K14317
nuclear pore complex protein Nup214
Organism
ptab Primulina tabacum
Pathway
ptab03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
142551314
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptab03019
]
142551314
Messenger RNA biogenesis [BR:
ptab03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
142551314
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
Motif
Other DBs
NCBI-GeneID:
142551314
NCBI-ProteinID:
XP_075516599
LinkDB
All DBs
Position
7:32791281..32811695
Genome browser
AA seq
1625 aa
AA seq
DB search
MATPPPTDGAPLIQLDEEIEGEEVGSRNYRFSKIGEPVPISSSTFKFDPESLPTQPLVVS
EKFRLLFVAHPCGFYVTRTRDVIASAEQIKDNQTAKSLQELCLVDVPVQNVTMLALSPDD
SMLAATEGSNAHFFAVSALLHKEQKPSFSVQLDDSICIKDLRWARNVAKVYVILSARGDL
FYGSGHGPLSHVMENVDSVDWSVNGNFVAVARKNNISILSSQLKEKFSFSLPFRSVIGDN
DSDVNQVIKVDSVRWIRPDCIAVGCFELNDDGEEQNYIVQVITSKEGRITDAGSKAIVLS
FNNVFLDFCSNVVLARNGPHLFLSYLDLYGLAFIANRNLSRQVGLLCWSLDGGKNEAAVI
EILNDAWILYIDSQGDGEENVILGIAVDKVSQDENAKLTLGDEDTEVSPSCVVICLTIDG
KISVFHFASAADALSSPNGATSEEDSTSHVSLKHELAQISFGSEEMSGEQISSKSDFPKL
GQNEKVKADAEASVNENIELKSAVNSHTLKLAEPTRLQSEISNQDSNVETLSTEDAKSSA
KKAVGNFSIQSLTWSNGRINTPKTSAGRFNSAPFNEVDDSDKCSSQSAGAVLRESSDISK
KAEPSAEFTAFGLRASNRFGNIHSLPTYTVSQAPLAEAVVPGKSPKSENHKDTFPSPFVT
GLPNSMQNASKQQFGNVEGMAKKLDILLQGIEGKGGFTDASINSQKKMVRELEDTMWALS
NRCRTWRGLMDDKSREVQLLLDKTAQVLVRKVYLEGIFKQDADSRYWELWNRQNLSSELE
LKRRHVLDLNQELINQLIELERHFNSLEFNKFGGNGALLRNSRASESGYGHSRQIQSVQS
LRHTVNAQLAAAEHLSGCLSEQMAVLSIESSGKENDVKKKLFESVGLSYNTDYCKSPDGN
RAFYTQSHREQFTVSGSIASITQSVRNQASPQCYEPETARRHQYSLDRSWASFEPPKTTV
KRVLLKGDYEKGSASQSRLNTDKQYLTPQAQKKVEVGSKLLSTSAASLNLSGSKGYQGTT
EIQTKQLNARQSTSLLQRESKKNSALLLGSTVTSSSDKGNFPPTDEKLRSDVLLTQKNDS
FSASDSILVQQSNKSFHLGPSVPTSLPEPSLTSPSDSIWGLERSKIGSKLTTEDLKFTLT
PASAFSSVLNDSERNLVAKTSAEPSQPCLDVTATTTPQSIFGSSSPSRYIPSSLPSSQSK
TSVPTLLPLTMSSQEASVDANQEVSLPQTSIPSSANSSLSSSLSNHSSISLSSPFFKLES
EKSFSSSTVAMYGSKTEGILPAQTSIVNTISATEKDDKIQTSPTQPILATSISGLKLIPS
ASSTLTQSEMDFSGSSINPSIVTSIIKSEKPHTVETPPPVAISSTGTVGRVKNVVTDASD
EEEMEEEAPETDQTTQAALGSLGGLGIGSIPNAGLGKPNPFGAVSQISSSFTMSAPSNGL
FRPATFSFQSAQPSEPVHPAALAFSGGFSSGNPSQISSGGGFGQPAQIGAGQQALGSVLG
TFGQSRQLGSGLTGNSSFGGGFMGNAAASASTHGGFASASTHGGFASASTHGGFASAFTS
GGFGGLAAGGGGFASVAVNAGPFASAGVGGFGAFSSQQGGGVPFGFGGGSDTGRPPSEFF
TQMRK
NT seq
4878 nt
NT seq
+upstream
nt +downstream
nt
atggcgactcctcctccaactgatggtgctcctctgatccaattggacgaagaaattgaa
ggagaggaagttggttccagaaattatcgtttctccaaaattggagaacccgttcccata
agcagcagcaccttcaaattcgaccccgaaagccttcccacccaacccttggtcgtctcc
gaaaagtttcgcctcctgtttgtcgcgcatccgtgcgggttttatgtaacgaggaccagg
gacgttattgcgtccgccgagcagattaaagacaaccaaactgcaaaatcgttgcaggag
ttatgcctcgtggatgttcctgtccaaaacgtgaccatgctggcgctttcacctgatgac
tccatgctcgccgcaacggagggcagcaatgcccacttttttgccgtcagtgctttgctc
cataaggagcaaaagccttccttttcagttcaacttgatgattccatatgcattaaggat
ttgagatgggcgagaaatgttgcaaaggtgtatgtaattctttcagctcgtggagattta
ttctatggatctggccatgggccccttagccacgtgatggaaaatgttgattctgttgat
tggagtgttaacggcaattttgttgctgtggcaaggaagaataatatcagcattttgtca
tcacaattgaaggaaaaatttagcttttcactaccttttcggtcggtgataggtgataac
gattctgatgttaatcaggtcataaaagtggactctgtgcgatggattcgtccagactgt
atagctgttggatgctttgagttaaatgatgacggagaggagcaaaattacatagtccaa
gtcatcacaagcaaggagggaagaatcaccgacgcaggttcgaaggcaattgtgttatcc
ttcaacaatgttttcttggatttttgttcaaatgttgtgctcgcccgaaatggaccacac
ctgtttctcagttatctagatctttacggccttgcatttattgctaataggaatctatcc
cgacaagttggattgctttgttggtcactggacggcgggaagaatgaagctgcagttatt
gaaattcttaacgatgcttggattctgtatattgattctcaaggtgatggtgaagaaaat
gtgattttaggaatcgctgttgacaaggtttcccaggatgagaatgccaaactcacactg
ggggatgaagatacagaagtttcaccttcttgtgttgttatatgcctaaccatcgacgga
aagatttcagttttccactttgctagcgctgcagatgctttgtcatcacccaatggtgct
acttctgaagaggacagtacttcacatgtatcattgaagcatgagttggctcagatttct
ttcggaagtgaagagatgagtggggagcaaatctcttcgaaatctgattttcctaagctg
ggccaaaatgaaaaggtaaaagcagatgccgaggcttctgtcaatgagaacattgaactg
aaatctgctgtaaactcacatacattgaaactggctgagccaacaagacttcagtcggaa
atatcaaaccaggatagcaatgtagaaactctatcaacagaggatgccaaatcatctgca
aaaaaagctgtgggaaatttttccattcagtctctaacctggtcaaatggtagaatcaat
actccaaaaacttctgctgggaggtttaactctgccccttttaatgaagttgatgattct
gataaatgctcttcacaatctgctggagctgtacttcgagaatcttcagatataagtaaa
aaagctgaaccttctgcggaattcactgcttttggactgagagcatcaaacagatttgga
aacatacactcactaccaacatataccgtgtcacaagcacctttggctgaggccgttgtt
cctggaaaatctcctaaatctgagaaccataaggacacttttccatctccgtttgttact
gggttgccaaactccatgcaaaatgcatcaaaacagcagtttggaaatgttgaaggaatg
gccaaaaaattggatatccttcttcaaggtattgaaggaaaaggtggtttcactgatgca
tctataaactctcaaaaaaaaatggttagagaattggaggacaccatgtgggctctttcc
aacagatgccgaacgtggaggggattaatggatgacaaatcaagggaagttcaacttcta
cttgataaaacagcacaagttttggtaaggaaagtatatttggaagggatcttcaagcaa
gatgcagatagcagatattgggagctttggaatcgtcaaaacctgagttctgaactggaa
ctgaagcgaagacatgttttagatctaaaccaggagttgataaatcagctgattgaacta
gaaaggcattttaattctttggagttcaataagtttggtggaaatggagcactgctaaga
aattcgagagcttcagagagtgggtatgggcattcaaggcaaattcagtccgtgcaaagt
ttgcgccacacagtgaatgcacaattagcagctgccgagcatctttcgggatgtctatca
gaacagatggctgttctgagtattgaatcgagtggaaaggaaaacgatgttaagaaaaag
ctcttcgagtctgttggcctctcctataacaccgactattgcaaatctccagatgggaac
agggccttttatactcagtcccaccgagaacagttcaccgtttcaggttcaattgcttct
ataacacagtctgtaagaaaccaagctagtccccagtgttatgaaccagaaactgcacgg
cggcatcaatattcactggatcggagttgggctagctttgagcctccaaaaacaactgta
aaacgggtgctcttaaaaggtgattatgagaagggtagtgcaagtcagtcaagattaaat
actgataaacagtatctcacccctcaagcacagaagaaagtagaagttggttcaaaactt
ttgagtacctcggcagcctctttaaacctttctggaagcaaaggttatcaaggcactact
gaaatacaaacaaagcagttaaatgcgagacaatcaacgtcgttgttacaaagggaatcc
aaaaagaattctgcattattactggggtcaacagtgaccagcagcagtgacaaaggaaat
ttcccaccaaccgatgaaaaattaaggagtgatgttcttctcacccagaaaaatgattct
ttttctgcaagtgattctattcttgtccaacagtccaataaaagcttccatctaggacca
tccgtgcccacatcgttacccgagccatcactaacatcaccatctgattccatttggggt
ttggaacgatctaaaattgggtcaaagctgacaactgaggatctgaaatttacacttact
cctgcatctgcttttagttcagttctgaatgattccgaaagaaatttagttgctaaaaca
tctgctgaaccaagccagccttgtcttgatgtgacagcaactaccacaccacaatcaata
tttggttcttcatcaccttcaagatatataccatcatcacttccatcttctcagtcaaaa
acaagtgtgccaaccttattgcctctgaccatgtccagtcaagaagctagtgtagatgca
aatcaggaggtatctctacctcagacatcaattccgtcaagcgctaattcgtctttgtca
tcatctttgagcaatcattcatcgatatccctttcttcaccatttttcaaattggagtct
gaaaaatcattttctagttctactgttgcgatgtatggctcaaaaacggaggggattttg
ccagcacagacttccattgtcaatacgatatcagcaacagaaaaggatgataagatacag
acgtcacctacacagcctattttagccacatctatatcaggtttgaagctaataccttcg
gcatcatcaacactaacacaaagtgaaatggattttagtggctcatcaattaatccgtcc
attgtcacatcaattattaagtcggaaaagcctcacactgttgagactcctccaccagtt
gcaatatcaagtactgggacagttggcagagtgaaaaatgtggtcactgatgcttctgat
gaggaggaaatggaggaggaagcccctgagacagatcagactactcaagctgcattagga
agccttggaggccttggaatcgggtcaatacctaatgcaggcctgggaaaaccaaatcca
tttggtgcagtatcccaaatttcctcttcatttacaatgtctgctcccagtaacgggctg
tttcgccctgcaacatttagcttccaatcagctcaaccttcagaaccagtgcatccagca
gccttggccttttctggtgggtttagttctggaaatcccagtcaaatttcttcaggaggt
ggttttgggcagccggcacaaattggagctggtcaacaagcactaggttcagtacttggt
acttttggacagtctaggcaactcggatctggtctaacaggaaacagtagttttggtggt
ggtttcatgggcaatgctgctgcttcagcttctacacatggtggatttgcttcagcttct
acacatggtggatttgcttcagcttctacacatggtggatttgcttcagcttttacatct
ggtggatttggaggtcttgcagcaggtggtggtggattcgcttctgtagcagtgaatgca
ggaccattcgcgagtgctggagttggtggatttggagcttttagcagtcagcagggtggt
ggtgtgccattcggtttcggtggtggctcagacactgggagacctccctctgaattcttt
acgcagatgaggaaatag
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