Primulina tabacum: 142551389
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Entry
142551389 CDS
T11246
Name
(RefSeq) spliceosome-associated protein 130 A-like
KO
K12830
splicing factor 3B subunit 3
Organism
ptab Primulina tabacum
Pathway
ptab03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
142551389
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ptab03021
]
142551389
03041 Spliceosome [BR:
ptab03041
]
142551389
03036 Chromosome and associated proteins [BR:
ptab03036
]
142551389
Transcription machinery [BR:
ptab03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
142551389
Spliceosome [BR:
ptab03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
142551389
Complex B
142551389
Complex C
U2 SnRNP specific factors
142551389
Chromosome and associated proteins [BR:
ptab03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
142551389
TFTC complex
142551389
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_BBS7
Beta-prop_EML_2
WDR55
Motif
Other DBs
NCBI-GeneID:
142551389
NCBI-ProteinID:
XP_075516720
LinkDB
All DBs
Position
7:34180982..34186993
Genome browser
AA seq
1211 aa
AA seq
DB search
MYLYSLTLQQATGIICAINGSFSGGKSQEIVVARGKVLDLLRPDDNGKLQSLLSVEIFGA
IRSLSQFRLTGAQKDYIVVGSDSGRIVILEYNKEKNAFDKIHQETFGKSGCRRIVPGQYS
AIDPKGRAVMIGACEKQKLVYVLNRDTVARLTISSPLEAHKSHTICYSICGVDCGFENPV
FAAIELDYAEADQDPTGQAANEAQKHLTFYELDLGLNHVSRKWSEQVDNGANMLVTVPGG
GDGPSGVLVCAENFVIYKNQGHPDVRAVIPRREDLPAERGVLIVSAAMHKQKSMFFFLLQ
TEYGDMFKVTLDHENDRVKELKIKYFDTIPVTSSLCVLKSGFLFAASEFGNHALYQFQAI
GDDPDVEASSATLMETEEGFQPVFFQPRKLKNLLRIDQIESLMPMMDMKVTNLFEEETPQ
IFSLCGRGPRSSLRVLRPGLAISEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSFANAT
LVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRINEWRTPGKR
TIVKVGSNRLQVVIALSGGEIIYFEVDMTGQLMEVEKHEMSGDVACLDISPIPEGRQRSR
FLAVGSYDNTIRILSLDPDDCMQILSLQSVSSPPESLLFLEVQASTGGDDGADHPASLFL
NAGLQNGVLFRTVVDMVTGQLSDARSRFLGLRAPKLFSIIVRGRRAMLCLSSRPWLGYIH
QGHFLLTPLSYETLEYSASFSSDQCAEGVVAVAGDALRIFTIERLGESFNETAIPLRYTP
RKFLVQPKRKLLVIIESDQGAFTAEEREAAKKESFESSGVGENGNIEQMENGDDEENNDP
LSDEQYGYPKAEAGKWVSCIRVLDPRSALTTCLLELQDNEAAFSMCSVNFHDKEYGTLLA
VGTAKGLQFWPKRSFEAGYIHVYRLKEDGKVLELLHKTQVDGIPLALCQFQGRLLAGIGP
VLRLYDLGKRRLLRKCENKLFPNTITSIQTYRDRIYVGDMQESFHYCKYRRDENQLYIFA
DDSVPRWLTAAQHIDFDTVAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGA
PNKVEEIVQFHIGDVVTCLQKASLIPGGGECIIYGTVMGGLGAFLPFTSRDDVDFFSHLE
MHMRQEHPPLCGRDHIAYRSSYFPVKDVIDGDLCEQFPTLPMDMQRKIADELDRTPGEIL
KKLEEIRNKII
NT seq
3636 nt
NT seq
+upstream
nt +downstream
nt
atgtacctgtacagcctaacacttcaacaagccacaggcatcatctgtgccatcaatgga
agcttctctggcgggaaatcgcaggaaattgtggtggcgcgtgggaaagtactcgacctc
ctgcgacccgacgacaatggtaagctacagtctcttctatctgtcgaaatttttggcgct
attcgctctttatctcaatttcgcctcactggagcgcaaaaagattacattgttgttggc
tctgattctgggcgcatcgtaatccttgaatacaacaaagagaagaacgcatttgataaa
attcatcaggaaacttttgggaaatctgggtgccgtagaattgtccctggtcagtattcg
gccattgaccctaagggtagagctgtgatgattggtgcttgcgagaagcagaagcttgtt
tatgttttgaatagggatacagtagctagattgactatttcatcacctctagaggcgcat
aagagccacactatttgttattccatttgcggggtggattgtgggtttgaaaacccagtc
tttgcagctatagaattggattatgctgaggctgaccaggaccccactggtcaagcggcc
aacgaggcgcagaagcatttgactttttatgagttggatttgggtcttaaccatgtttca
aggaaatggtccgaacaggtcgataatggtgctaatatgcttgtcacagtgcctggtggt
ggggatggtccaagtggtgttcttgtgtgtgcagagaattttgtcatatataagaatcaa
gggcatccagatgtcagagcggtgattccgaggcgtgaggacttaccagctgagcgtggg
gttttgatcgtctcagctgctatgcataagcagaaatccatgtttttcttcctgttgcaa
actgagtatggagatatgtttaaagtgacgttggaccatgagaatgacagagtaaaagag
ttgaagataaaatattttgatactattcctgtcacatcatctttgtgcgtcttgaagtca
gggtttctatttgctgcatctgagtttgggaaccatgctttgtatcaatttcaggcgata
ggagatgatcctgatgtggaggcatcatcagctacactgatggaaacagaagaaggtttt
cagcctgtgtttttccagcctagaaaactgaagaatctacttaggatagaccaaattgag
agtctgatgccaatgatggatatgaaagtcactaatctatttgaggaagaaactcctcag
atattctcactttgtgggcggggtcctcgttcatcactccgtgttttgagacctggtttg
gctattagtgaaatggcagtatcacagttgcctggtgttccaagtgctgtgtggactgtc
aaaaagaatgtcaatgatgaatttgatgcctatattgttgtttcttttgcaaacgccact
ctcgtgctttccattggtgagactgttgaagaagtaagcgacagtgggtttctagatact
acaccttctcttgctgtttctttgattggcgacgattctttgatgcaagtgcatcccagt
ggtattaggcatatcagggaagatgggcgtattaatgagtggagaactccaggaaagaga
acaattgttaaggttgggtctaacagacttcaagttgtcattgcattgagtggaggggaa
attatatattttgaagttgacatgactggtcagttgatggaggttgagaagcatgaaatg
tcaggagatgttgcctgtttggatatttctcctatccctgaaggaagacagagatcacgg
tttcttgctgttggatcttatgataacaccattcgcattttgtctttggatcctgacgac
tgtatgcagatactaagtttgcaaagtgtttcatcacctccggaatctctcctatttctt
gaagttcaggcttctactggaggtgatgatggggctgaccaccctgcaagcctctttttg
aatgctggtctacaaaatggagttttattcaggacagtagttgatatggtgactggacag
ctgtcagatgcccgatctcgtttcttaggacttagagcaccaaagctgttttctataatt
gtgagaggacggagagctatgctttgcttgtcaagtagaccttggctaggttatatacac
caaggacatttccttctcacaccattgtcatatgagactctcgaatattctgcttcattt
tcatcggatcagtgtgcagaaggtgttgttgctgtcgctggggatgcattaaggattttt
actattgaaagacttggagaatcttttaatgaaacagccatacctttgaggtatactcct
aggaaatttttagttcaacccaaaaggaagctgttggtaataattgagagcgatcaggga
gcattcactgcagaagagcgtgaagctgcaaaaaaggagtccttcgagtcttctggagtg
ggggaaaacggaaacatagagcagatggagaatggtgatgatgaggaaaacaatgatcca
ctttctgatgagcagtatggatatccgaaggcggaagccggaaagtgggtttcttgcatt
agagttctggatcctaggtcagctttgacaacctgtctgctagagcttcaggataatgaa
gctgcgttcagcatgtgctctgtgaatttccacgataaggaatatggaacacttttggct
gttggaacggcaaaaggtcttcagttttggcccaaaagatccttcgaggctggatatatt
catgtatataggcttaaagaagatggaaaagtccttgagcttttgcacaagacacaagtg
gacggtatacctctcgcattatgccaattccaaggaagattgctcgctgggattggtcct
gtacttagattgtatgatttggggaaaaggaggttgcttagaaagtgtgagaataaatta
ttccccaacacaatcacttccatccaaacctatcgcgaccgaatttatgtgggggacatg
caagagtcgtttcactactgcaagtacagacgtgatgagaatcagttatatatatttgct
gatgactctgttccaagatggcttactgctgctcagcatatcgacttcgacaccgtggct
ggtgcagacaaatttggaaatatctactttgtccgattgccacaggatgtgtctgatgag
attgaagaagaccccactggtggtaagataaagtgggaacaggggaagttgaatggagca
ccgaataaagtagaggaaatagttcaatttcacattggtgatgtggtaacttgcttgcag
aaagcatctctgattcccggaggtggagagtgcatcatatatgggactgtaatgggtggt
ttgggggcattccttccatttacatcacgtgatgatgttgacttcttctctcatctggag
atgcacatgcggcaggagcacccacctttgtgtggcagagaccatattgcttacagatca
tcctattttcccgtgaaggatgttatagacggagatttgtgtgaacaattcccaaccttg
cccatggatatgcaacgtaaaattgctgatgagctggatagaactccgggggagatttta
aagaaactggaagaaataagaaataagatcatttaa
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integrated database retrieval system
