Primulina tabacum: 142551487
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Entry
142551487 CDS
T11246
Name
(RefSeq) RNA-binding KH domain-containing protein RCF3-like
KO
K21444
poly(rC)-binding protein 3/4
Organism
ptab Primulina tabacum
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptab03019
]
142551487
Messenger RNA biogenesis [BR:
ptab03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
142551487
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH-I_KHDC4-BBP
KH_2
KH_KhpA-B
Motif
Other DBs
NCBI-GeneID:
142551487
NCBI-ProteinID:
XP_075516868
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Position
7:complement(35453423..35460386)
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AA seq
679 aa
AA seq
DB search
MTPSKRPHELSLSEVDVRRKWQKSAAVGSHHAPSRGSSARHIIRFLFPASKIGAVIGKGG
SNIAQICQETGAMVHVEEIMPGCDERVVVIAGSDKDKDKNNEVVSEQVKAEGEETKITEL
GDNPDGEQTKIPDSGDNPDEHGETDEDKRSVPVDHSPSEKENETSTVQKALLVVFDKMID
GLPETGEESNKQASSVVRLLVFSSQVGCLLGKAGTVIKQMSSESGAQIRILPKDKLPSCA
SSFDELVQISGNIDAVRKALQSVSRQLLHSFLRDEDSLLPDVGGPSSHSSGLSRQERFPS
SNYPFHGHGPPISHGFHDAGVSVPGRMNLPPEILSFRLLCNSEKVGGIIGKGGSIVKTIQ
HETGCEIKVLDGVGDSEDRIIVISGPAHPNDGISAPQEALLQVQSRIFRAAHENKEKVMI
AKLLVASNQIGCLLGKGGSVISEMRKSTGAYIRILGKDQIPDCASENEEVVQVNGDLEVV
QEALLQITTRLRNHFFRDAFPPLSHPPNPPFMDRVPPFPSYMGRMSFSPPGSFSARGPPF
NNFDGPGGRPPHGGFDPLDDHPPFAHDFPRPWGPGSMGFPEYPGAPPRRLGGFPGGHQPA
IITSTSMEVVVPRFVVPAIYGEDGGCLRQILEISEAKITISDSMPGATETMIRISGTPEQ
TNAAQSLIQAFVMSENEGS
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgacaccttctaagagaccgcacgagctctctctttctgaggtcgatgttagaaggaaa
tggcaaaaatcagcagcggtaggttctcatcatgcaccttctagaggatcttctgctaga
cacattatacgatttcttttccctgcttccaaaattggagctgtcattggcaaaggtggc
agcaatatagctcaaatatgccaggaaactggagcaatggtccatgttgaggaaattatg
cctggatgtgatgaaagagtcgttgttatagctgggtcagataaggacaaggacaagaat
aatgaagttgtgagcgaacaggttaaggctgaaggcgaggagacaaaaatcactgaattg
ggtgataatccagatggtgagcagacaaaaatccctgattctggtgataatccagatgaa
catggggaaactgatgaagacaagcggtctgttccagttgaccattccccatcggagaag
gaaaatgaaacttcaaccgtccagaaagctttgttggttgtgtttgataaaatgattgat
ggtttgccagagacaggtgaagaaagcaacaagcaggcttcatctgttgttaggttactt
gttttctccagtcaagtgggctgcctgttagggaaagccggcactgtgattaaacaaatg
tcatctgaaagtggggctcagattcgaattcttccaaaggacaaattgccttcttgtgca
tcttcttttgatgaactcgtccagatatccggaaacattgatgctgttaggaaagctctt
caatctgtatcccgacaattgcttcatagttttcttcgtgatgaggactctcttttgccc
gatgttggtggtccgtcatctcattcctctggtctttctaggcaggaaagattcccatct
tccaactatccatttcatggacatggaccaccaatttctcatggatttcatgatgctggg
gtcagtgttcctggcagaatgaatcttcctcctgaaatcctgagcttccggttgttgtgt
aacagtgagaaggtaggcgggataattggaaagggaggttctatagtaaagaccatccaa
catgaaactggttgtgagatcaaggtccttgatggtgtgggcgattcagaggatcgcata
atagttatatctggcccagctcaccccaatgatggaatatctgccccccaagaggcacta
cttcaagtacagtccagaatatttagagccgcccatgagaacaaagagaaagttatgata
gccaaactccttgtcgcctctaatcaaattggttgcctccttggaaagggtggatctgtt
atttctgagatgaggaagtcaactggagcttatatccgtatattgggtaaagaccagatc
ccggactgtgcttcagaaaatgaagaagtagttcaggtaaatggggaccttgaagtagtt
caagaagctctattgcaaataacaacaaggttgagaaatcattttttccgagatgcattt
ccaccactgagtcaccctcctaatcctccgtttatggaccgagtgcctccgtttccatcg
tacatgggaaggatgtcgttttcacctcctgggtcgttttctgctagaggtccaccattt
aacaattttgatggtcccggtggtcggcctccacatggtggttttgatccgcttgacgat
cacccaccttttgcacatgattttcccagaccgtggggacctggttctatgggattccca
gagtatccaggagcccctccgagaagacttggtggatttccaggaggacatcaaccagct
attatcacaagtacgagtatggaagtagttgtgcctcgctttgttgttcctgcaatctat
ggagaggatggtggatgtctgagacaaattcttgagatatccgaagctaaaataaccatc
tctgattcaatgcctggggcaacagaaaccatgattagaatatctgggacgcccgagcag
acaaacgctgcacagagtctcattcaagcttttgtaatgagtgagaatgaaggatcttga
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