Primulina tabacum: 142551631
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Entry
142551631 CDS
T11246
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 28
KO
K13181
ATP-dependent RNA helicase DDX27 [EC:
5.6.2.7
]
Organism
ptab Primulina tabacum
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ptab03041
]
142551631
03009 Ribosome biogenesis [BR:
ptab03009
]
142551631
Enzymes [BR:
ptab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
142551631
Spliceosome [BR:
ptab03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
142551631
Ribosome biogenesis [BR:
ptab03009
]
Eukaryotic type
Pre-60S particles
Helicases
142551631
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
Motif
Other DBs
NCBI-GeneID:
142551631
NCBI-ProteinID:
XP_075517082
LinkDB
All DBs
Position
7:37023985..37032956
Genome browser
AA seq
748 aa
AA seq
DB search
MAKSKSFFFEAPSDEEIDHESETESDDGESGVADPELDPGSEIEEEKRVPKSKKSQSPWD
FSSYSESVFDEHSRRSTTSIDDKISKALKKQPIPTAVGYDSDEHSDLEPHHQEDYKPDDI
DEEETKSGKDSKSFFAPSEGVSFQSNSFLELHLSRPLLRACEALGYSKPTPIQAACIPLA
LTGRDICGSAITGSGKTAAFSLPTLERLVYRPKSRPAIRVLILTPTRELAVQVHSMIEKL
AQFMTDIRCCLVVGGLSIKVQEAALRSLPDIVVATPGRMIDHLRNSMSVHLDELAVLILD
EADRLLELGFSAEIHELVRSCPKRRQTMLFSATMTEEVDDLIKLSLNKPLRLSADPTTKR
PTTLTEEVVRIRRLREANQEAVVLALCSKTFTDKVIIFSGTKKAAHRLKILFGLAGFKAA
ELHGDLTQAQRLDALEIFRKQQVDFLIATDVAARGLDIIGVQTVINFACPRDLTNYVHRV
GRTARAGRAGYAVTFVTDNDRFLLKAIVKRAGSRLKSRIVSEQSIKKWCEIIEQMEDQVT
SILQEEREEMALRKAEMEATKAENMIAHKDEIYARPKRTWFVTEKEKKLVAKTAKEVLDK
PKGNGKDVMSAEQAEELKMKEKRKREREKNLPRKKRRRLEAARETLEDEDEIKGEVQHKK
ENNGISLVDVAYRRAKAVKAAKRAVDAGRIMRKTDKKLKHPIQKNKSRTEEMQELFKDDM
SEKRQKRATGGVGRKKSSFKSKSRYKRR
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atggctaaaagcaaaagcttcttcttcgaagccccaagtgatgaggaaatcgatcacgaa
tctgaaactgaatccgatgatggggaaagtggagtagcagatcccgaactcgatcctggc
tcggaaattgaagaagaaaaaagagttccgaaaagcaaaaaatctcagtcaccatgggac
ttctcgtcctattccgaatcagtcttcgacgaacactcaaggcggagcaccacttcaatc
gacgataaaatttcgaaagctctcaaaaaacaacctatcccgacagctgttggctatgat
tctgatgaacattctgatctcgaaccccatcaccaagaggattataagccggacgacatc
gacgaagaggaaaccaagagtgggaaggatagtaagtccttttttgcaccatcggaaggg
gtgagtttccaatctaattcgtttttggagctccatctttcgaggccgttgcttcgggct
tgtgaggctttgggctacagtaagccgactccaattcaggctgcttgtatacctttggct
ttaactggacgagatatttgtgggagtgctattacgggttctggaaagaccgctgcattt
tctttgccaaccttggagaggctggtataccgaccaaagagtagaccagcaataagggtt
ctaatcctcactccgacaagggagttggctgttcaggttcatagcatgatagagaaactt
gctcagtttatgacagatatcagatgttgtctggttgttggtggtctttcaataaaggtg
caagaggcggccttgcggtcactgccggatatagttgttgccactccagggcgcatgata
gatcacctacgcaactctatgtcagttcatctggatgaacttgcagttttaatactcgat
gaagctgatcggctcctagagcttggatttagtgctgaaattcatgaactggtcagatca
tgtcctaaaaggaggcagaccatgctcttttcggcaaccatgactgaggaagtcgacgat
ctaatcaaactctctttgaacaaacccttgcgcttatcagctgatccaaccacaaagcgt
ccgacaactttaactgaagaggttgttcgtatacgtcgattgcgagaagcaaatcaggaa
gcagttgttcttgcattatgttccaaaacctttacggataaagtgattattttcagcgga
accaagaaggctgctcatagattgaaaattttgtttgggttagctggttttaaagcagct
gaacttcatggagacctcactcaggctcagcgtctagatgccctcgaaattttcaggaag
cagcaagttgattttctgattgcgacagatgttgctgctcgtggtcttgatattattggt
gttcagacagttattaattttgcatgtcctcgggaccttactaattacgtacatcgagtg
ggtcggacagctagagctggcagagcagggtatgcggttacttttgtaactgataacgat
aggtttcttctaaaagctattgttaaaagagctggttcaaggctgaagagccgaattgtt
tctgagcaatcaataaagaagtggtgtgaaataattgagcaaatggaggatcaagtgacc
tcaattcttcaagaggaaagggaagagatggccctaagaaaagctgaaatggaggcaaca
aaggctgaaaacatgatcgcacacaaagatgaaatctatgcacgcccgaaaagaacatgg
tttgtcacagagaaggaaaaaaaacttgtagcgaaaacagcaaaggaagttttggataag
ccaaaaggtaatggcaaagatgtgatgagtgctgaacaagcagaagagttgaagatgaag
gaaaagagaaagcgagagcgtgagaaaaatttgcccaggaagaaacgacggagattggag
gcagctagagagacattagaggatgaagatgaaatcaagggagaagtgcaacataagaaa
gaaaataatggaatctctcttgttgatgtggcttatcgtcgagcaaaagcagtgaaagct
gcgaagagggctgttgatgctgggagaattatgagaaagacggataagaagttgaagcat
cctatccaaaagaataaatctagaacagaagagatgcaggaacttttcaaagatgacatg
agtgagaaaaggcaaaaaagagcaactggaggagttgggaggaagaaatcatcatttaag
agcaaatcacgttataagcgcagatag
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