Primulina tabacum: 142551676
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Entry
142551676 CDS
T11246
Name
(RefSeq) F-box protein SKP2A-like
KO
K03875
F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
ptab Primulina tabacum
Pathway
ptab04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
142551676
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ptab04121
]
142551676
Ubiquitin system [BR:
ptab04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
142551676
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Gene cluster
GFIT
Motif
Pfam:
DUF7885
LRR_6
LRR_4
F-box-like
F-box
LRR_At5g56370
LRR_Zer-1
LRR_8
LRR_At1g61320_AtMIF1
Dimerisation2-like_dom
Motif
Other DBs
NCBI-GeneID:
142551676
NCBI-ProteinID:
XP_075517156
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Position
7:complement(37410678..37413008)
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AA seq
379 aa
AA seq
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MREKGEGLGLDFEKMMVFGDVGCVNENEIVVCQVGGGLCGGSKMSEWKDIPVELLLRILS
LVDDPTVIVASGVCHGWRDAISWGLTHLSLSWCKKNMNDLVLSLVPKFTKLQVLILRQDS
PQLQDVAVETITNHCSDLQELDLSKSFRLTDRSLYALARGCPNLMKLNISGCSAFSDTAV
AYLSGFCRKLKILNLCGCVKAASDRALKAIGYNCHQLQSINIGWCDRVGDEGVKSLAYGC
PDLRALDLCGCVLITDESVVALANNCLHLRSLGLYYCKNITDRAMYSLAHSRVKNKHDIW
ASVKKNRYEEEGLTNLNISQCTALTPHAVQVLCDSFPALHTCSGRHSLIISGCLRLTSVH
CACAVQAHRATHAMAHLAH
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgagagaaaaaggggagggtctgggcttggattttgagaagatgatggtttttggtgat
gtggggtgtgtgaatgaaaatgaaattgtggtttgtcaagttgggggaggtctttgtgga
ggatcgaagatgagtgagtggaaagatattccagtggagcttttgttgaggattctttct
ttggtggatgatcccacggtgattgtggcatctggtgtttgtcatggatggagggatgcc
atttcttggggcctcactcatctctcactctcttggtgcaagaagaacatgaatgatctg
gtgctatcactggttccaaaattcacaaaacttcaggtccttattctgcgacaagactcg
cctcaacttcaggacgttgctgttgaaacaatcacaaatcattgtagtgacctccaagag
ttggatctgagcaagagtttcaggcttactgatcgatccttgtatgccttagcacgtggc
tgccctaatctcatgaagctgaacataagtggctgttcggctttcagtgatactgctgtg
gcatatttgtctgggttttgccgaaaattgaaaatcttgaatctttgtggatgtgtcaag
gctgcctcagatagggcattgaaggccataggttacaattgtcatcaattgcagtcgata
aacataggatggtgtgaccgagttggtgatgaaggggttaagagtttagcctatggttgt
cctgatctccgagctctcgacttgtgtggatgtgttcttataacagatgagagtgttgtc
gccttggcaaacaactgccttcatctgcgatccctcggtttatactactgcaagaatatc
accgacagagccatgtattctctggcacatagccgagtgaaaaacaagcatgatatatgg
gcatctgtgaagaagaatagatacgaggaggaaggtcttacgaacctgaacatcagccaa
tgcactgctcttactcctcacgcagtgcaggtactgtgtgactcatttccagctcttcat
acatgttccggtcgccattcccttataatcagtgggtgcctgaggttgacgtcagtgcat
tgtgcatgtgctgtccaagctcaccgtgccacgcatgcaatggctcatctagctcactga
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