Primulina tabacum: 142551739
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Entry
142551739 CDS
T11246
Name
(RefSeq) LOW QUALITY PROTEIN: receptor homology region, transmembrane domain- and RING domain-containing protein 2-like
KO
K15692
E3 ubiquitin-protein ligase RNF13 [EC:
2.3.2.27
]
Organism
ptab Primulina tabacum
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ptab04121
]
142551739
Enzymes [BR:
ptab01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
142551739
Ubiquitin system [BR:
ptab04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
142551739
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
PA
zf-RING_11
zf-C3HC4
zf-C3HC4_2
zf-rbx1
zf-RING_UBOX
zf-ANAPC11
zf-RING_5
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
142551739
NCBI-ProteinID:
XP_075517237
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Position
7:37880884..37883656
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AA seq
440 aa
AA seq
DB search
MLKFWGFFRCLFCLMCSFTAFGKVVLIGNNVTSSFQDIEANFAPSVKGSGIYGTLYMAEP
LDACSPLTNKIVTKINDTRYPFALIIRGVCSFDEKVRRAQVAGFKASIVYDNEDGELVAM
AGNSAGVKINAVFVSKASGETLGKYAGSVDTEIWISPVYENSAWSIMAISFISLLAMSAV
LATCFFIRRHRIRRERPQAPQAPHVREFHGMSRRMVKAMPSLTFTAVSEDYCTSSTCAIC
LEDYKIGEKLRILPCCHKFHAICVDAWLTSWRTFCPVCKRDARTSTGEPPASESTPLLSS
SPASSALSSFRSSLASSSAMQIGQSSLQSTSFARPQSISTTPYNQYYHQSPNLSTSRSSV
DLRNMSSQRSLGSYLISPHSLGYPSMSPLNSRYMSPYIPSPSNASSSYIGSSSRPPNLLH
YSESAASFSPFASAQSLPGC
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgttgaaattctggggatttttccgctgccttttctgtttaatgtgttctttcacggct
tttgggaaggtggttttgattggcaacaatgttacttcttcttttcaagacattgaagct
aattttgctccatcagtgaaagggtcggggatatatggcacattatacatggcagaacca
ttggatgcatgctctcctttgactaataaaattgttacaaaaataaatgacaccaggtat
ccatttgctttgataatcagaggagtatgtagctttgatgaaaaggtcaggagagcgcaa
gttgctgggttcaaagcatccatcgtctacgataatgaggatggcgaactagttgcaatg
gctggaaattctgccggtgtaaagatcaatgcagtttttgtgtccaaagcctcaggtgaa
acactgggaaaatatgctggttctgttgatactgagatatggatatccccagtgtatgaa
aattcagcatggtctatcatggctatatctttcatatcgctactcgccatgtctgctgtg
ttagctacttgtttcttcattcgaaggcatcgcataagaagagaacggcctcaagctcct
caagctcctcatgtacgagaatttcatgggatgagccgccgcatggtaaaagctatgcca
agcctgacttttactgcagtttcggaggactattgtacctcaagtacgtgtgccatatgt
cttgaagactataagattggtgagaagcttagaattctcccatgctgccacaaattccac
gccatatgtgtcgatgcatggctaacatcatggagaacgttctgtccagtctgcaagcgt
gatgcaagaaccagcacaggtgaaccaccagcatcagaatctacacctttactgtcatcc
agcccagcatcatctgcgctatcgtcttttagatcatcattagcatcatcatcagccatg
caaatcggtcaatcatctctgcaatcaacctcctttgctcgtccccagtccatctctacc
actccttacaatcaatattaccatcaatcgcctaacctaagtacaagtcgaagctcagtc
gatctaagaaatatgtcttcacaaagatctcttggaagttacttgatttcacctcactca
ctgggttacccttcaatgtcgcctcttaattccagatacatgtctccatatatccctagc
ccaagcaatgcttcatcgagttatattgggtcttcaagtcggcctcctaatctgctgcat
tacagcgagtcagctgcaagcttttcaccttttgcatcagcccagtctcttccaggatgc
taa
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