Primulina tabacum: 142551803
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Entry
142551803 CDS
T11246
Name
(RefSeq) putative pectate lyase 4 isoform X1
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
ptab Primulina tabacum
Pathway
ptab00040
Pentose and glucuronate interconversions
ptab01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
142551803
Enzymes [BR:
ptab01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
142551803
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
142551803
NCBI-ProteinID:
XP_075517329
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Position
7:38420339..38423880
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AA seq
378 aa
AA seq
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MGNRHGHFSNHGHRQNQNPTIPPQFGPTSQFENLAPKHSNPATGNSSMCLCLPYGHVDSS
LRAIAGQAEGFGRFAVGGLHGAVHRVITLADDGPGSLRDACRKKEPLWIIFEVSGTIELS
SYLNVSSYKTIDGRGQRIKLTGKGLRLKECEHVIICNLLFEGGRGHDIDGIQIKPNSKHI
WIDRCSLKDYDDGLIDITRESTDITISRCHFANHDKTMLIGADPSNINDRCIRVTIHHCF
FDGTRQRHPRVRFGKVHLYNNYTRNWGIYAVCASVESQIYSQCNIYEAGQKKVAFKYYTE
KAADKVQECTGCVKSEGDLFVPGTQPGLMPLPSETSVFHPSEFYETWTVEAPTADLKHFL
QHSSGWRNTLRPADFASS
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaccgtcatggccatttctcgaatcacgggcaccgacaaaaccaaaaccctaca
attccccctcaattcggcccgacctcgcagtttgagaatttagctccaaaacactctaat
ccagccactgggaattcaagcatgtgtttgtgtctgccgtacggacatgtggattccagc
ttgcgggctattgctgggcaagctgagggctttggtcgattcgccgtcggtggtctgcac
ggcgctgttcatcgtgttatcactctcgcagatgatggacctggttcacttcgcgatgca
tgtcgtaaaaaagagcctttgtggatcatcttcgaagtttcaggcaccatcgagctctca
tcttatttaaatgtgtcatcttataagaccattgatgggcgtggtcaaagaattaaactc
accggaaaaggtttgaggttaaaggaatgtgaacatgtgattatctgcaaccttttattc
gaaggaggaaggggacatgatattgatggaattcaaattaaaccaaattcaaagcatatt
tggattgatcgttgcagcctcaaggattacgacgacgggctgatagatattactcgagag
agcaccgatattaccatttctcgatgccattttgcgaatcatgataagaccatgcttatt
ggtgcggatccttctaatataaatgatagatgtattcgggtcaccatccaccattgtttc
tttgatgggactcgacaacggcatcctcgtgtcagatttgggaaagtacatctgtacaat
aactatactagaaattggggaatatacgctgtttgtgccagtgttgaatcacagatatac
tctcagtgcaacatatatgaagctgggcagaagaaggtggcttttaaatattacacagaa
aaggcagctgacaaggttcaggaatgtacaggctgcgtaaaatcagaaggtgatttattt
gttcccggtacacaaccaggcttgatgccactcccaagtgagacgagcgtgttccatcca
agcgaattttacgagacatggaccgtagaagctcctactgctgatctgaaacattttctc
caacactcttcaggatggcggaacaccctgcgacctgccgactttgcttcttcttaa
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