Primulina tabacum: 142551964
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Entry
142551964 CDS
T11246
Name
(RefSeq) DNA topoisomerase 1-like isoform X1
KO
K03163
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ptab Primulina tabacum
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ptab03032
]
142551964
Enzymes [BR:
ptab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
142551964
DNA replication proteins [BR:
ptab03032
]
Eukaryotic type
DNA Topoisomerases
142551964
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I_N
Topoisom_I
Topo_C_assoc
PIN_5
Motif
Other DBs
NCBI-GeneID:
142551964
NCBI-ProteinID:
XP_075517614
LinkDB
All DBs
Position
7:complement(39447968..39455251)
Genome browser
AA seq
892 aa
AA seq
DB search
MAVDAFNEKKALDDVDDDDDQPLVFKRSSSSSKQNQVNSETKKLSSQKHDQRLGRPTSCQ
QSRNGESSTMQKDNLVPPSFKAPPIKSPLASPKSSSSSAKESSVKSYAANSKRPMPVTDK
PNPDKKQVKEEQPLTQAADETNNSEDSGDDKPLSARLPSSSSKSNSNHAKQGPNTLALVQ
KNSLPKKEDSDDEKPLSTKFQVKSDVRVSISRSINSDVRKPILTNAEHNGSSSTDHSQKK
PSPILKKRALDSVKFECGSSEKKPRISDASIAVPRAKPKVEDDDDDHVPILQRMKNQNSS
EKKSLSAKKVTKSVSASATMTNKKSKKIVKNTKYSISSKVLPSSGEGQKWTTLVHNGVIF
PPPYKPHRIKMLYKGKPVVLTPEQEEVATMFAVMLDTEYMNKPKFKENFMTDWRKILGKN
HTIQKLEDCDFTPIYEWHQKEKEKKKQISTEEKKALKEEKLNQEEKYMWAIVDGVKEKVG
NFRVEPPGLFRGRGEHPKMGKLKKRIQPSDIIINIGKDAPIPACPIPGESWKEIRHDNTV
TWLAYWNDPINQKEFKYVFLAASSTLKGQSDKEKYEKARLLKNYIQGIQAAYTKDFSSKD
LTRKQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPNILKFDFLGKDSI
RYQNEVVVETAVFKAIQQFRNGKKGSEDLFDKLDTSKLNAHLKELMPGLTAKVFRTYNAS
ITLDDMLSREMKGGEVAEKVVVYQHANKEVAIICNHQRTVSKSHSAQMLRLDEKIEELKG
AVEELMEDLARAKKGKSPLKNADGKPKRNMNPKALEKKIAQTAAKIEKMERDKETKEDLK
TIALGTSRINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMDVDPEFRF
NT seq
2679 nt
NT seq
+upstream
nt +downstream
nt
atggctgttgatgctttcaatgaaaaaaaagcgttggatgatgtggatgatgatgatgat
cagccactagtatttaagaggtctagctcctcttcaaaacaaaaccaggtgaactcagaa
acgaagaaattatcatctcaaaagcatgatcaacgattggggaggccgacatcttgtcaa
caatctcgtaatggtgaaagttctaccatgcaaaaggataatctggttcctccctctttt
aaggcaccacctattaagtctcctttggcaagtccaaaatcatctagttcttctgccaag
gaatcatcagtcaagtcttatgcagcgaattctaaaagacctatgccggtaacagataag
ccaaaccctgataagaaacaagtcaaagaagagcagccattgacccaagctgctgatgaa
accaataattcagaggattctggagatgataaaccactcagtgctaggcttccttctagc
tcctcaaagagcaactctaatcatgccaaacaagggcctaatactttagctttggttcaa
aagaatagtctcccgaaaaaggaagattcagatgatgaaaagcccttgtctactaagttt
caagtaaagtctgatgttagggtatccattagtaggtctattaattctgatgtgaggaaa
cctatactgaccaatgctgaacacaatgggtctagctcaacagatcactctcaaaagaaa
ccttctcctattctaaagaagcgagctctggattctgtgaaatttgaatgtggatcttct
gaaaaaaagcctaggatttctgatgcatccattgcagttcctagagctaaaccaaaggta
gaggatgatgatgatgatcatgtccccatattacagagaatgaagaatcagaattcttca
gaaaagaaatcattatctgctaaaaaagtcactaaatctgtatctgcatcggcaacaatg
acgaacaagaaatcaaagaagatcgtgaaaaacacaaaatattccatttcgtcaaaggtt
cttcccagctctggtgaaggacaaaagtggactactttggtccataatggtgtgattttt
ccacctccatacaagcctcacagaattaagatgctctacaagggaaaacctgttgtctta
actccagaacaggaagaggttgcaacaatgtttgcggtgatgctggatactgaatacatg
aacaagcctaagttcaaagagaattttatgacagactggcgaaagatactgggaaaaaat
cacactattcagaagttggaagattgtgattttactcctatatatgaatggcatcaaaaa
gaaaaggagaagaagaaacagattagcactgaggagaagaaagccttaaaagaggagaaa
ttgaaccaggaggagaagtatatgtgggcaatcgttgatggagtcaaagagaaggttgga
aacttcagggttgagccacctggattgtttcgaggccgtggcgagcaccctaagatggga
aagctaaaaaaacgaatacagccaagtgacataatcataaatattgggaaggatgctcca
attcccgcgtgtcctatccctggggaaagctggaaagaaataaggcatgacaatacggtg
acctggttagcatattggaatgatccaataaaccagaaagaattcaaatatgtgttccta
gcagctagcagcaccttgaaaggccagagtgacaaagagaaatatgagaaggctaggctt
ttgaagaactatattcaaggtattcaagcagcttataccaaagatttttctagtaaggat
cttaccaggaagcagatagcagttgcaacctatcttattgacaaattagctctcagggca
ggcaatgagaaggatgatgatgaagctgatacagttggttgctgcacattgaaagtagaa
aatgtagaacctgtgcctccaaatatcttgaagtttgatttccttggtaaagactctata
aggtatcaaaatgaagtagttgttgaaactgctgttttcaaagcaatccaacagtttcga
aacgggaaaaagggtagtgaagatcttttcgacaagcttgacactagcaaactgaatgct
catctaaaggaactgatgcccggactcacagccaaagtatttcggacatacaatgcatct
attacgttagatgatatgttgagtagggagatgaaaggtggagaggttgctgaaaaagta
gttgtttatcaacatgccaacaaggaggttgcaatcatttgtaatcatcagcgtactgtc
tcaaagtcccacagtgcccagatgttacgtttggatgaaaagattgaagaattaaagggt
gctgtggaagaactaatggaggatttggcgagggcaaagaaagggaagtcccccctgaag
aatgctgatgggaaacctaagcggaatatgaaccctaaagcattagagaaaaaaattgct
caaaccgctgcaaagattgagaaaatggaacgggacaaggagaccaaagaagatctgaaa
actatagctttgggcacgtcgagaatcaactaccttgatcctagaattacagttgcatgg
tgtaagcgccatgaagttcctatcgagaagattttcaacaagtcccttctggcgaaattt
gcatgggcaatggatgtggatccagaattcagattttga
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