Primulina tabacum: 142551997
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Entry
142551997 CDS
T11246
Name
(RefSeq) nuclear pore complex protein NUP205 isoform X1
KO
K14310
nuclear pore complex protein Nup205
Organism
ptab Primulina tabacum
Pathway
ptab03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
142551997
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptab03019
]
142551997
03036 Chromosome and associated proteins [BR:
ptab03036
]
142551997
Messenger RNA biogenesis [BR:
ptab03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
142551997
Chromosome and associated proteins [BR:
ptab03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
142551997
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup192
FAST_2
Motif
Other DBs
NCBI-GeneID:
142551997
NCBI-ProteinID:
XP_075517669
LinkDB
All DBs
Position
7:complement(39700266..39735981)
Genome browser
AA seq
1885 aa
AA seq
DB search
MVSPKQLISIIESSLLGQTPRTSAQRIELLHAIRHSLPSLKSLLAYPPPKPSDRAEVQSK
EVRLPDVGSIPLDDQDVQIALKLSEDLHLNEINCVRLLISANQERGLLGREPVEIFRLAA
GLWYTERRDLLTSIYMMLRAVVLDQGLEADLIADIQRNLEDLLHSGLRQRLINLIKELHR
EEPTGFGGPSSERYILDSRGALVERKAVISRERIILGHCLVLSILVERASPKDVKDMFFV
LKDCAKEFGVSTDPLQHQITYSLLFSLVIAILSDALSAITDKVPVLSHDASFRREFKDIV
MVSGNDPIVEGFVDCVRLAWAVHLMLLCDGNDAQDDIDSTISNDIYPCLTVVFTNNIFKF
WLDKVLQTAAYQNDDEDMVYMYNAYLHKQITCFLSHPLARDKVKEAKEKAMAMLSPYRII
ATHNEMNDVSGQTQETSAMTQPPFVSLLEFVSEIYQKEPELLLGNDVIWTFVKFSGEDHT
NFQTLVAFLKMLSTLACKPEGASKVFELLQGKSFRSIGWSTLFDCLSIYDEKFKMALQSP
GAVLPEFQEGDARALVAYLTVLQKVVENGNPIERKNWFPDIEPLFKLLSYENVPPYLKGA
LRNAIAVFVHVSPVMKDTIWRYLEQYDLPVVVGPSAGSGGHSVDTQVYDMRFELNEIEAR
SEHYPSTISFLNLLNTLIAEERDVSDRGRRFICIFRFIYDHVFGPFPQRAYADVYEKWQL
VIACLKHFQMMLSMYDIGEEDIEIVTDQPTLSVVAKPSMVNMQLPVIELMKDFMSGKTVF
RNMMGIILPGVSFLITERTNQIYGKILEKAVLLSLEIILLVMERDIVVSDFWRPLYQPLD
VILSQDHNQIIALLELVRYDFQPQIQLCSIKILSILSSRIVGLSQLLLEIKAASGLIEDY
AACLELRSEDCQNIEDSSEDPGVLIMQLLIDNIGRPAPNMTHLLLKFDVDIPIERTLLQP
KFHYSCLKVILDVLDKLSRPDVNSLLHEFSFQLLYELCTDPLTSVPTMDLLCSKKYKFFV
KHLNSIGVAPLPERNSGQALRISSLHQRSWLLKLLAVELHTADTTNSVHRETCQSILAEL
FGQKLVERGINYDISTYDKNVTDIATSSSTNRSKILEMLEIIQFESPDITLKSSQFVSSV
KFASLAEDILANPGTSERGVYYRSERGDRLIDLASFRDRLWQKFNLINPQLSSFASETEL
NEIREAIQQLLRWGWNYNKNLEEQAAQLHMLTSWSQIVEISASQKISFIENRSEVLFHLL
DASLNASGSSNCSLKMSQILTQVGLTCMAKLRDERFAFPGGLNSDTVTCLDIIMAKRLSN
GACHSILFKLIMAILRHESSEALRRRQYALLLSYLQYCWHMLDPDVPSTILQFLSDDEQD
NGDLNLEKIDKDQAELAHANFAIMRKEAQSILNLVLKDATQGSESAKTVSLYVLDALICI
DHDKFFLGQLQSRGFLRAHLLNISNFSFQDGLFSLDSMQRICTLEAELALLLRISHKYGK
SGAQVLFSMGSLEHVASCRTLNLQMKGNVQRFDTRIGMNLSVNVDKQRMIVAPILRLVYS
LTSLIDTSELFEVKNKVVREILDFVKGHQLLFDRILREDLSDADELTMEQINLVVGILSK
VWPYEENDEYGFIQGLFGMMCTLFSRDPDVFASTQSSRSEIQLKAEASISRLCFSLSSYL
YFLVTKKSLRLQVNVSEAPTDYRASAGCQPPTLTLLVFFLGTMTTAIERAAEEKYILLNK
IKDINELARQEVDEIINMYVPHDCVSSPENIHKRRYIAMVAMCQIVEHKNRLIMLLLLLM
QNLMNIVLAHFQDSAYISDYSHSMKVIAHSTQLDANEDLHTLCQNSIPVLERLEALREDK
TGQSLKIFGRLARSLKEIAIQKLST
NT seq
5658 nt
NT seq
+upstream
nt +downstream
nt
atggtttcacccaaacaacttatatcgataatcgaatcttcactactggggcagactcca
cgaacttcagcacagcgaatcgaactcctccacgctattcgtcactctcttccttccctc
aaatctctcctcgcatacccgcctcccaaaccatcagacagagctgaagtccagtcgaaa
gaagtgagattgccagatgttgggtcaatcccacttgacgatcaggatgtacagatagct
ttgaaattgagcgaggatctccatctcaatgaaatcaactgcgtgcgtttgctcatttcg
gccaaccaagagcggggtttgcttggtcgagagccagtagaaatttttcgccttgctgct
ggactttggtatacagagagaagagacctactaacatcaatttacatgatgctgagggct
gttgtgctcgaccaaggtcttgaagctgatcttattgcggatattcaaagaaatttggaa
gatcttttgcattctggacttagacagcgattgattaatcttattaaggaacttcataga
gaagaaccaacaggatttggcgggcctagttctgaacgctacattcttgactcaaggggt
gctttagtggaaaggaaagctgtgatttccagggaaaggatcatccttggccattgcctt
gtcctttccattttggttgagcgtgcaagtccaaaagatgtcaaagatatgttctttgtt
ttaaaagattgtgccaaggagtttggtgtgagcaccgatccattgcagcatcagattaca
tatagtcttctgttctctcttgtaattgctatcttatcagatgctttgagtgcaataacc
gataaagtgccggtgttgtctcatgatgcatcgtttaggcgtgaatttaaagacattgtg
atggtttctggaaatgatcctattgttgaaggctttgttgattgtgtaaggcttgcatgg
gcggtacatttgatgttgctttgtgatggaaatgatgcacaggacgacatagatagtact
atttccaatgacatctacccatgtttaacggtcgttttcaccaataatatcttcaagttt
tggctggacaaggttcttcaaactgctgcatatcagaacgatgacgaggatatggtctac
atgtacaatgcttatcttcacaagcaaataacatgctttctttctcatccgcttgccagg
gacaaggtcaaagaggccaaagagaaggctatggctatgcttagcccatatcgtattatt
gctactcataatgagatgaacgatgtcagtgggcaaactcaagaaacttcagctatgaca
caaccaccttttgtctcccttttggagtttgtgagtgaaatttatcagaaggaacctgag
ctactgttgggtaatgatgttatatggacatttgtgaagttttctggtgaggatcacact
aattttcaaacacttgtagcattcttgaaaatgctgagtacactggcttgtaaaccagag
ggtgcttcaaaagtttttgagctgcttcagggaaaatcatttcgttctattgggtggagt
accttgtttgactgtttatccatttatgatgaaaagttcaagatggctcttcagagtcct
ggagcagtgctgccggagtttcaggaaggagatgcaagagctcttgtggcatatttgact
gtcctacaaaaggtcgtggaaaatgggaaccctattgagaggaagaactggtttcccgat
attgaaccattgtttaagctcctcagttatgagaacgtgcctccttatctcaagggtgct
ttgcgtaatgccattgctgtttttgtgcatgtatcacctgttatgaaagatacgatttgg
aggtacttggagcagtatgatctaccagtagttgttgggcctagcgctgggagtggtgga
cattctgtggacactcaggtttatgatatgagatttgagttaaatgaaattgaagcacga
agtgagcattacccttcaactatatcatttctcaatctcttaaatactcttattgctgag
gaaagggatgtcagtgacagaggacgaagatttatttgcatattcagatttatctatgac
catgtatttgggccattcccacagagggcctatgcagatgtttatgagaaatggcaatta
gttatcgcttgtctcaagcatttccaaatgatgttaagcatgtatgatattggtgaagaa
gatattgaaattgttactgatcagcctacactttcagtggttgcaaaaccttctatggtt
aacatgcagcttccagtcatagagttgatgaaggattttatgagtgggaaaactgtgttt
cgaaacatgatgggcattatattaccaggagttagttttttaatcactgaacgtacaaat
caaatttatgggaaaatactcgaaaaggccgtactgctttctttagaaatcattcttctt
gtcatggagagagatatcgttgtttctgatttctggcgcccactttaccagcctttggat
gtcatactctctcaggatcataatcaaattatagctttattggagcttgttagatatgat
tttcagccccaaattcaactttgctccatcaaaatcttgagcattctgagttcacgtatt
gttgggctctcacagttgctgttagaaatcaaggctgcaagtggtctgattgaggattat
gctgcctgcttagagctgcggtctgaagactgtcagaatattgaggatagcagtgaagat
cctggtgttctaataatgcaacttcttattgacaatatcggtagaccagcccctaatatg
acccatttattacttaaatttgatgttgatatcccaattgaaaggacattgcttcagcca
aaatttcattacagttgcttgaaggttattctcgatgttttagataagctttcaaggcct
gatgtcaattctttgcttcacgaatttagttttcagctcctctatgaattatgcacggat
ccacttacttcggtgcctaccatggacttgttgtgctccaaaaagtacaagttctttgta
aagcacctgaactcaattggtgttgcccctcttcctgaaagaaatagcgggcaggcgctg
cgtatcagctcacttcatcagagatcgtggttgttaaagcttttggctgtagaattacat
acagctgacacaacgaattcagtacatcgagaaacatgccaaagtattcttgctgaattg
tttgggcaaaaacttgttgaacgcgggattaattatgatatttcgacctacgacaaaaat
gtcactgatattgccacaagcagttcaaccaacagaagcaagattctagaaatgcttgaa
atcatccagtttgaatcaccagatattacattaaagtcttctcagttcgtctctagtgta
aagttcgcatctctggctgaggacatactcgccaacccgggaacctctgaaaggggtgtg
tattatcgttcagagcgtggggaccgacttattgacctagcttctttcagagatagactt
tggcagaaattcaatttgatcaatccccaattaagttcttttgcgagtgaaactgaattg
aatgaaataagagaggcgatccaacaattattgagatggggatggaattataacaaaaac
cttgaagaacaagctgctcaacttcatatgttaacaagctggtctcaaattgttgagata
tctgcatcccaaaagatttcattcattgagaaccgatcagaagttttgtttcatttgcta
gatgcctccttgaatgcttctggttcttcaaactgctccttaaagatgtcacaaatattg
acacaggttggtctcacatgcatggccaaactgcgtgatgaaagatttgcattccctggt
ggcttaaattctgacactgttacatgtcttgacattattatggcgaaacggttatccaat
ggggcttgccattctattttgtttaagcttatcatggcaattcttagacatgaatcttcg
gaagcattaagaaggcgccaatatgctttgcttcttagttatctccagtattgttggcat
atgcttgatccagatgttccctcgacgattctacagtttttatcagacgacgaacaagac
aatggagatttgaatctcgaaaagattgacaaagatcaggctgaattggctcatgcaaat
tttgctatcatgagaaaggaagcgcaatcgattcttaacctggttttaaaagacgccact
caaggaagtgaatctgcaaaaactgtgtcactatatgttttagatgcgttaatttgtatt
gatcatgataagttcttcttgggccaacttcagagtcgaggatttttgagagcccacttg
ttgaacatcagtaatttttcatttcaggatggtctgttttctttagattcaatgcagcga
atctgcactttagaagcagagcttgccttacttttgagaattagccacaaatatgggaag
tctggggcacaagttcttttttcaatgggttctctggaacacgttgcttcgtgcagaact
ctgaatctgcaaatgaagggaaatgtccagcgttttgatacgaggattgggatgaattta
tctgttaatgttgataaacaaagaatgattgttgctcctatactgagattggtgtattcc
ttgacttcgctgattgatacttctgagttatttgaggtgaagaataaagttgtacgcgaa
atattagattttgtcaaaggtcatcagttgctcttcgatcgaattctccgggaagatctt
tctgatgctgatgaattgacaatggaacaaattaatcttgttgttggcatacttagcaag
gtttggccatatgaagaaaacgatgaatatggcttcattcaagggctatttgggatgatg
tgtacgcttttctcccgcgatccagatgtttttgcttctacccaatcatcgcgatcggag
attcaactgaaggctgaagctagcatatcccgcctttgttttagtttaagctcttatctt
tattttcttgtgaccaagaaatccctgagactacaggtaaatgtttcagaggctcctaca
gactatcgtgcttctgccggatgccagccacctacgctgactttgcttgttttctttctt
ggtactatgacaacggctattgaaagagctgcagaggaaaaatatatactgcttaacaag
attaaagacatcaacgagttagcaagacaggaagttgatgaaatcatcaacatgtatgta
cctcatgattgtgtttcatcgccagaaaatatacataaaaggagatatattgctatggtg
gcgatgtgccagatcgttgagcacaagaatcgacttattatgcttttgcttctgcttatg
caaaacctgatgaacattgtccttgctcatttccaagatagtgcatatataagtgattac
agccactctatgaaagtaattgcacatagcacccaacttgatgccaacgaggacctccat
acgctgtgtcagaactcaattccagttcttgaaagacttgaagctctaagagaggataaa
acagggcagagcctcaaaatttttggtagattagcccgatctctcaaggaaatagcaatt
cagaagttgtcaacctaa
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