Primulina tabacum: 142552005
Help
Entry
142552005 CDS
T11246
Name
(RefSeq) glycine--tRNA ligase, chloroplastic/mitochondrial 2-like isoform X1
KO
K14164
glycyl-tRNA synthetase [EC:
6.1.1.14
]
Organism
ptab Primulina tabacum
Pathway
ptab00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
142552005
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ptab03016
]
142552005
Enzymes [BR:
ptab01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.14 glycine---tRNA ligase
142552005
Transfer RNA biogenesis [BR:
ptab03016
]
Prokaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
142552005
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_synt_2f
tRNA-synt_2e
DALR_1
Motif
Other DBs
NCBI-GeneID:
142552005
NCBI-ProteinID:
XP_075517683
LinkDB
All DBs
Position
1:55911044..55949525
Genome browser
AA seq
1072 aa
AA seq
DB search
MSILTLPLVTSIFKNSPNKYKPHVAFLFTTVRSSSPLHIFQPKRFSSSAATHSSSSSVSS
SNDQCLQKSSSLSSVLTFQQAIQRLQEYWASVGCAVMQCSNTEVGAGTMNPLTFLRVLGP
EPWNVAYVEPSIRPDDSRYGENPNRLQRHTQFQVILKPDPGNSQDLFIRSLSALGINVND
HDIRFVEDNWESPVLGAWGLGWEIWMDGMEITQFTYFQQAGSLPLMPVSVEITYGLERIL
MLLQGVDHFKKIQYADGITYGELFLENEKEMSAYYLEHASVDHIHNHFDLFEVEARRLLD
SGLPIPAYDQLLKTSHAFNVLDSRGFVGVTERARYFGRMRSLARQCAQLWLKTRESLGYP
LGVAAQPDHIGFRKEDLDEAAKRVSAGPQKFILEIGTEELPPNDVVNACNQLKDLVEQLL
EKQRLNHGDVQTYGTPRRLVICVDNLSDKQVANQVEVRGPPASKAFDGLGNPTKAAEGFC
RKNGVPLTSFYRKVEGKAEYIYVRAEEPSRLALEVLSEGLPGMLGKISFPKSMRWNSEVM
FSRPIRWILALHGDVVVPFTFSGILSENVSHGLRNTPSATFTVANADSYTDVMLDAGIAI
SFEQREMEILEKSNTLAKSIGGSLVLQSGLLNDIVNLVEAPHPILGKFCESFLELPKDLL
IMVMQKHQKYFAITDHDGKLLPYFIAVTNGAINEDVVRTGNEAVLRARYEDAKFFYGLDT
SKSFSEFRSQLKGILFHEKLGTMLEKMTRVQHLVIQVGLSLGIAEDMLQVIRDAASLAMS
DLSSAVVTEFTSLAGVMGRHYALRDGYSEQIAEAMFEITLPRFSGDILPKTDAGAVLAIA
DRLDSLVGLFAAGCQRSSTNDPFGLRRISYGLVQLLVETNRNLELRNSLELAAALQPIEV
ESQTIDDVQQFVLRRLEQLLIDQGIRPEVVRSVLAERGNRPSLAAMSAHRMEALSQGEML
PKVIEAYSRPTRIVRGKDVNDDLVVNEAAFVSMEERALWSTFSSLRSKIHRDMEVDDFVK
ESCLLVQPLEDFFNNVFVMVEDERIRMNRLALLRQISDLPKGIADLSVMPGF
NT seq
3219 nt
NT seq
+upstream
nt +downstream
nt
atgagcatactgacgctgccattagtgacttccattttcaagaattcgcccaacaaatac
aaaccccacgtcgctttcttgttcaccaccgtccggagttcttctcctcttcatatattc
cagccaaaacgcttctcttcttctgcggccactcattcttcttcatcttcggtctcgtca
tccaatgatcagtgcttacagaaatcgtcttctttatcttccgtgctcacgtttcagcaa
gccattcagcgcctccaggagtattgggcttctgttggatgtgctgtgatgcaatgcagc
aacactgaggttggagctggtactatgaatcctctgacctttttaagggtccttggtcca
gaaccgtggaatgttgcgtatgtagaacctagtatccgaccagatgatagtcgttatggt
gaaaatccaaatagacttcaaaggcacactcaattccaggtgatattgaagcctgaccct
ggaaattctcaggacttgttcatacggagcttatccgccctaggtattaatgttaatgat
catgacattcgatttgtagaagataactgggagagtccggtgttaggtgcctggggattg
ggctgggaaatctggatggatgggatggaaattactcaattcacctacttccagcaggct
ggaagtctgccgttgatgccagtgtcagttgagatcacttatggtcttgaacgaatcctc
atgttgcttcagggggttgaccatttcaagaaaattcaatatgccgacgggataacatat
ggagagttgtttttggaaaatgagaaggaaatgagtgcatactatttggagcatgccagt
gtggatcacatccataaccattttgatctttttgaggttgaagctcgccgtttgcttgat
tcaggacttcctattcctgcgtatgaccagcttttgaagacatctcatgctttcaatgta
ttggattctcgtggatttgttggggtgacggaacgtgctcgttactttggccggatgcgt
agtttagcccgccaatgtgcacaactttggttaaagaccagggaatctcttgggtaccct
ttgggggttgcagctcaacctgatcacataggttttcgaaaagaagacctcgacgaggca
gcaaaaagggtctctgctggaccacaaaagtttattcttgagatcgggacagaggagttg
ccgccaaatgatgtggtcaatgcctgtaatcaactgaaagatctagttgagcagttgctg
gagaaacagagattgaatcatggagatgtgcaaacatatggtacaccacgcagacttgtg
atttgcgtagataacctaagtgataagcaagtggcaaatcaagttgaggtgcggggacct
ccagcctcaaaggcattcgacgggctagggaatcctaccaaggctgctgaaggtttttgc
cgcaaaaatggtgtgcctttgacctccttttacagaaaggttgaaggaaaggcagagtac
atttatgttcgtgcggaggagccttcacgccttgctttggaggttttatctgaagggcta
cctgggatgcttggcaaaatatcttttccaaagtcaatgagatggaactctgaggttatg
ttcagtagacccatccgatggatattggcgctacatggagatgtagttgttccatttaca
ttcagtggtattttgagtgaaaatgtgtctcatgggcttcggaacactccatctgctact
tttacggtagcaaatgcagattcttataccgacgtaatgctggacgctggaatagccatc
agttttgagcaacgagagatggaaattttggagaagtctaataccttggcaaaaagtatt
ggtggttctcttgttctgcaaagtggtttacttaatgatattgtaaatcttgttgaagca
cctcatccaatacttggcaagttctgcgagtcctttctagagcttccaaaagatctgctg
ataatggtcatgcagaagcatcagaaatattttgcgataacagatcatgatggaaagcta
ttgccatatttcattgctgtcacaaatggagcaataaatgaagatgttgttcggacagga
aatgaagctgtactcagagctcgatacgaagatgcgaagttcttctatgggttggacacc
agcaagagcttttcagaatttcgaagtcaactgaaaggaatcctttttcatgaaaagttg
ggtacaatgctggagaagatgacacgtgttcaacatctggttattcaagtgggtttatct
ctaggaatagctgaagatatgctccaagttatccgcgatgctgcgtcattagccatgtca
gacctttcttccgcagttgttacagaatttacctcccttgctggggtaatgggacgccac
tatgcattgagagatggctattcagagcagattgcggaggcgatgtttgagattacactt
ccacgattttctggtgacatacttccaaaaacagatgctggggcagtattggcaattgct
gacagattggacagccttgttgggttgtttgctgctggttgccaacgaagttcaaccaac
gacccctttggtctgcgaagaatctcttatggtcttgtgcaattgttggtagaaaccaac
cggaatttggagctaagaaattctttagagcttgctgctgcactccagcccatagaagta
gagtcacagacaattgatgatgtgcaacaatttgtgttgagaagacttgaacaacttttg
attgaccaaggaatacgtccagaagtggttcgttctgttctcgctgagcgtggaaatagg
ccttctctggcagctatgtctgcacacagaatggaagccttatcacaaggtgaaatgctg
cccaaagttattgaagcatattctcgtccaacaagaattgttcgcggaaaggatgtcaat
gatgatttggtggtgaacgaggcagcttttgtatcaatggaagagagagctttgtggagc
actttttcatcattaaggagtaaaatacatcgagacatggaagtggatgattttgttaaa
gaatcttgcctcctagtgcaacctttggaagatttcttcaataatgtttttgttatggtg
gaagatgaaagaatcagaatgaacaggcttgcactcctacggcaaatttcagaccttccg
aagggaatagcagacctctcagttatgccaggtttctag
DBGET
integrated database retrieval system
