KEGG   Primulina tabacum: 142552026
Entry
142552026         CDS       T11246                                 
Name
(RefSeq) UBP1-associated protein 2B-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
ptab  Primulina tabacum
Pathway
ptab03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ptab00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    142552026
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ptab03019]
    142552026
   03041 Spliceosome [BR:ptab03041]
    142552026
Messenger RNA biogenesis [BR:ptab03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     142552026
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     142552026
Spliceosome [BR:ptab03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    142552026
SSDB
Motif
Pfam: RRM_1 RRM_7 Nup35_RRM_2 Nop14 CDC45
Other DBs
NCBI-GeneID: 142552026
NCBI-ProteinID: XP_075517714
LinkDB
Position
7:40009219..40011949
AA seq 443 aa
MAKKRKARSSLQTHEKKSKVIREEEEEEEESSDEEEEEEEEEESSSEEEESESESEEDDD
EEEEDDISSSEDEENDEASKRSTVRELLEPFGKDQIIDLLKEAGSKDASLLAKIIEMADS
DPTHRNLFIHGIGYDATSEQLVQAFKPFGEIEESKLIVDKNTGRAKGYAFVLFKTRAAAK
KALKVPQKKIGSRNVSCQLAAVGSTNPAIQASEVGKLKIYVGNVGPTVTPDKLKAFFRRY
GEIEDGPMGTDPATNLFKGFAVITYKSSEGYKKALEEPIKVFENCQLHCKKFVENLTYKN
NVALQSTLSNANAPVSDLRYGGLGMNAGILGANLTPAGYLMSQNPGIGLADNAMLAAGYN
AAGLMTSGLSSSFGGMGSNYGMNSMSPSVMGRYGSQTPFNGMVPPQSAQTGHSNVGTSTT
AAADGRHPGNAGKEPAITSYFRR
NT seq 1332 nt   +upstreamnt  +downstreamnt
atggcaaagaaacgtaaagcccgatcctcgctacaaacccatgaaaaaaaatccaaggta
attcgtgaagaagaagaggaggaggaggaatcctccgacgaagaagaagaagaagaagag
gaagaagaatcctcgtcggaagaagaagaatcagaatctgaatctgaagaagacgatgat
gaggaagaggaagacgatatctcctcatctgaagacgaagaaaacgacgaagcatcgaaa
agatcaactgttcgtgagctactagaaccttttggaaaagaccaaatcatagacctgctt
aaagaggcgggctctaaggacgcctcgcttcttgccaaaatcatcgaaatggcggattct
gatccgacccaccggaatttattcattcatgggattggatatgacgccacctcggagcag
ctcgtccaggccttcaaaccatttggagaaatagaggagagcaagttgattgttgataag
aatactggtcgcgctaagggctacgcattcgtgttgttcaagacgagggctgctgccaaa
aaggctctgaaagtcccacagaagaagattggaagcagaaacgtttcctgccaacttgca
gctgttggctcgactaatcctgcaattcaggcatcagaagtggggaaattgaagatttat
gttggaaatgtgggacctaccgtgacacctgacaagctgaaggccttctttcggaggtat
ggggaaattgaggacggacctatggggacggatccggccaccaatctgttcaaaggcttt
gctgttattacttacaagtcttccgaggggtacaagaaggctttggaggagccgattaaa
gtttttgagaattgccaattgcattgcaagaagtttgtggaaaatcttacttataaaaac
aacgtggctctgcaaagtaccctaagtaatgccaatgctcccgttagtgatcttaggtat
ggtggtttaggaatgaatgcagggattttgggtgctaacttgaccccagctgggtatttg
atgtcgcaaaatcctgggattgggttggcagataatgcaatgctggccgcgggatataat
gcggctggtttaatgacatctggattgagttcatcttttggtgggatgggttcgaattat
ggaatgaatagcatgagtccaagtgtgatggggcgctatggatcacaaacgccttttaat
ggaatggtgcccccccagagtgctcaaacaggacattcgaatgtagggacatctacaacg
gctgcagcggatgggagacatccaggaaatgctggaaaggaacccgcaataacttcttat
ttccgccgctag

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