KEGG   Primulina tabacum: 142552077
Entry
142552077         CDS       T11246                                 
Name
(RefSeq) target of rapamycin complex subunit LST8-1 isoform X1
  KO
K08266  target of rapamycin complex subunit LST8
Organism
ptab  Primulina tabacum
Pathway
ptab04136  Autophagy - other
Brite
KEGG Orthology (KO) [BR:ptab00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04136 Autophagy - other
    142552077
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ptab04131]
    142552077
Membrane trafficking [BR:ptab04131]
 Autophagy
  Other autophagy associated proteins
   mTORC1 complex
    142552077
   mTORC2 complex
    142552077
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 WDR55 Beta-prop_TEP1_2nd EIF3I Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_C Beta-prop_EIPR1 WDR90_beta-prop_4th Beta-prop_WDR75_1st Beta-prop_DCAF4 ANAPC4_WD40 Beta-prop_IFT140_1st WD40_MABP1-WDR62_1st Beta-prop_HPS5 Beta-prop_Vps41 Beta-prop_IFT122_1st Beta-prop_RIG_2nd WD40_RFWD3 NBCH_WD40 Beta-prop_IFT140_2nd Beta-prop_SCAP PROPPIN Beta-prop_DCAF12 Beta-prop_IP5PC_F Beta-prop_WDR19_1st Beta-prop_NUP159_NUP214 Beta-prop_NWD2_C Beta-prop_SPT8 Beta-prop_WDR35_TULP_N CFAP43_N
Other DBs
NCBI-GeneID: 142552077
NCBI-ProteinID: XP_075517796
LinkDB
Position
7:complement(40345633..40349915)
AA seq 324 aa
MITQFDSGRQKVGVATGLSNILNLINGYRRSGRRELAFCYHTSSKQVNRLEITPDKCGLA
AAGNPHIRLFDVNSNSPQPVMSYDSHTNNVMAVGFQCDGNWMYSGSEDGTVKIWDLRAPG
CQREYESRAAVNTVVLHPNQTELISGDQNGNIRVWDLRANSCSCELVPEVDTAVRSLTVM
WDGSLIVAANNRGTCYVWRLLQGTQTMTNFEPLHKLLAHDGYILKCLLSPELCEPNRYLA
TASADHTVKIWNVDGFALEKTLTGHQRWVWDCVFSVDGAFLITASSDSTARLWSMSNGEE
IKVYKGHQKATVCCALHDGNEPSS
NT seq 975 nt   +upstreamnt  +downstreamnt
atgatcacacaattcgattctgggaggcaaaaagtgggcgttgctaccggactatccaat
atcctgaatctcatcaatggttacagaaggtctggcagacgtgaattggctttctgttat
catacctcttcaaagcaagtaaataggctcgagattacacccgataaatgcggcctagca
gcagcggggaatcctcatatacgattatttgatgttaattcaaacagtcctcagccagtg
atgagctatgattctcacactaataatgtgatggcagttggatttcagtgtgatggaaat
tggatgtattcaggttctgaagacggcaccgtaaagatttgggacttgagggcaccgggt
tgccagagagaatatgaaagccgtgcagcagttaatactgttgtcttgcacccaaatcag
actgaactgatatctggggaccaaaatggcaacatccgtgtgtgggatttgagagctaat
tcttgcagctgtgagctggttccagaagtggatacagcagtacgatccttgacagtaatg
tgggatggaagtctgatagttgcagcaaacaatcgagggacatgttatgtatggcgattg
ttgcaagggactcaaactatgaccaatttcgagccactgcataagttgctggctcacgat
gggtatattcttaaatgtctcctctctcctgaattgtgtgaaccaaaccggtacctggcc
actgcatctgctgaccataccgtcaaaatatggaatgtagacggttttgcattggaaaaa
actctaacaggacatcagcgctgggtctgggattgtgttttctctgttgatggagctttt
cttatcacagcttcttctgattcaactgcaagattatggtccatgtccaatggtgaagaa
attaaagtctacaaaggtcatcagaaagcaactgtatgttgtgctcttcatgatgggaac
gaaccttcaagctga

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