Primulina tabacum: 142552124
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Entry
142552124 CDS
T11246
Name
(RefSeq) septin and tuftelin-interacting protein 1 homolog 1
KO
K13103
tuftelin-interacting protein 11
Organism
ptab Primulina tabacum
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ptab03041
]
142552124
Spliceosome [BR:
ptab03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
142552124
Other components
Complex C specific factors
142552124
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Paralog
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Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
Motif
Other DBs
NCBI-GeneID:
142552124
NCBI-ProteinID:
XP_075517873
LinkDB
All DBs
Position
7:40697913..40702466
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AA seq
853 aa
AA seq
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MDEYQEMERFSMDNDYDDGQWIGGEFIGKRKQKRAQTKDDILYGVFASGDSDSDYEVSGS
KKHRKSKTTDYTRPVNFVSTGSVLPNQEIDRNSKEDKQAAEEDNTRPLGLGLGFGSSSSK
NANNVAGHIEADKDEDEDFLPAGFGKRIKEGAKLRQEREKEKAVLAKKSSQAMRRELEPS
DVGSFEKHTKGIGMKLLEKMGYKGGGLGKNEQGILSPIEAKLRPKNMGMGFNDYNEASRS
VLPQLDEKPLAQLSQASEGRPKEKLWSKRAPQKKKVYITAEELLAKKQEQGLEVFQKVFD
MRGPQVRVLTNLENINEEERARENNVPMPELQHNIRLIVDLAELNVQKLDRDLRKERETV
VALQKEKEKLQEEAYRQRKQLDNMEERVGVLDRISDQSSNGLLTLQSLATSFMDLQTRFS
DDYTLCNLSCIACSYALPLFIRIFQGWDPLQNPRHEVEVVSTWKKLLQGKDSLSISDATS
PYNQLLMEVVFPAVRISGTNTWQARDPEPMLRFLESWEELLPPHILGIILDSIVIPKLFA
AVDSWDPRRETIPIHSWIHPWLPLLGQKLENCYHTIRNRLASVLHAWHPSDMSAYYILSP
WQTVFDPASWEQLMVRYIIPKLLVIMHELQINPANQKLDEFYWVRTWTAAIPIHHMLQLM
DIFFNKWQEVLYHWLRSSPNFEEVTKWYLGWKELLPPELQANEHVRFRLNIGLDMMNQAV
EGMEVVQPGLKENLSYLRVLEQRQFETQKKASVQAQQQTSTGMGNGVQADGMGGGVEMNL
REVIEIHAQQNGLLFKPKPGRTQDGHQIYGFGNISIIVDSLNQKVFAQNEDTWSLVSLEQ
LLELHNRSTLKRR
NT seq
2562 nt
NT seq
+upstream
nt +downstream
nt
atggatgagtatcaggaaatggaacggtttagtatggataatgactacgacgatggtcag
tggattggaggcgaatttattgggaagcgcaaacaaaaacgagctcagacaaaagatgat
atcctttatggtgtatttgcttctggtgatagtgattctgattatgaggtgtctggttca
aagaaacataggaaatccaagacgactgattatacgaggcctgtcaattttgtctcgact
ggctctgttttgcctaatcaggagattgatcgtaattccaaggaagataagcaagcagct
gaggaagataatacccgacctctgggtttgggtcttggatttggttcatcctcttccaaa
aatgccaacaatgttgctggacatattgaagctgacaaggatgaagacgaagattttttg
cctgctggatttggaaagaggataaaggaaggtgcgaagctgcgacaagaaagggaaaag
gaaaaggccgtgctggctaagaaatcttctcaggccatgagaagagaattggagccatct
gatgttggttcctttgaaaagcataccaagggcattgggatgaagttgctggagaaaatg
ggttacaaaggaggcggtcttggtaaaaacgagcagggaattttatctcccatcgaggcc
aagctgcggcctaagaatatggggatgggttttaatgactataatgaagctagtcgttca
gtgttaccacaattggatgaaaaaccactggctcaattaagtcaagcttcagagggtcgc
ccaaaagagaagctttggtcgaagagagctccacagaaaaagaaagtttatataactgcc
gaagaattgctggccaagaagcaagagcagggtcttgaagtttttcagaaggtttttgac
atgagaggaccacaggttcgagttttgaccaacttggagaacataaatgaggaagaaaga
gccagggaaaacaatgttccaatgcctgaactccagcacaatatcagattgatagttgat
ttggccgagctaaatgtacaaaagttggatagggatctgcggaaggagagggagactgtg
gttgctttgcagaaagaaaaggagaaacttcaggaagaggcatatcgccaaaggaagcaa
ctcgataacatggaagagagagttggtgtactggaccgaataagtgaccagagctcaaat
ggattgctgacgctacagtcacttgctacatcatttatggacttgcagactagattttct
gatgattacacattgtgcaatttatcatgcattgcatgctcatacgcccttcctttgttt
attagaatatttcagggatgggatccacttcaaaatccgagacatgaagtggaggtggta
tccacgtggaagaaattgcttcaagggaaagattcattgagtatctctgatgccacatct
ccgtataatcaattgctgatggaagttgtgtttcctgctgtgcgaatatctgggaccaat
acttggcaggcacgagatccggaacccatgcttaggtttttggagtcttgggaagagctt
ttacctcctcatattctaggcatcatacttgatagcatagtcataccgaaattattcgct
gcagtagactcatgggatccacgcagagaaaccatcccaattcattcttggatacatcca
tggctgcctttattgggacagaagttggaaaattgttatcatacaatacgtaataggttg
gcgagtgtccttcatgcttggcaccctagtgatatgtctgcttattacatattgtctcct
tggcaaaccgtgtttgatcctgctagttgggagcaactgatggttcgttacatcattcca
aaattattggtaatcatgcatgagttgcaaataaatcctgccaatcagaaacttgatgaa
ttctattgggtacgaacatggactgctgctattcctatccatcacatgctacaactgatg
gatatcttcttcaataaatggcaagaagttttgtatcattggttacggtcaagtccaaac
tttgaggaagtaacaaaatggtatcttggctggaaagaacttcttccacccgaactccaa
gcaaatgagcatgttcgatttaggcttaatattggtctggacatgatgaaccaggctgtg
gaaggcatggaggtggtgcagccaggccttaaagagaacttaagttatctcagggtgctt
gaacaaagacaattcgagacgcagaaaaaagcatcggtacaagctcaacagcagacctct
actggcatgggcaatggtgttcaagcagatggtatgggtggtggggttgagatgaatttg
agggaagttattgaaattcatgctcagcagaatggtctcttgtttaaacctaaacctgga
agaacccaggatggacaccagatatacggctttggtaacataagcataatagtagactcc
cttaaccaaaaagtatttgcacaaaacgaggatacatggtctttggtatcccttgaacag
ttgctggagttgcacaatcgttctactttgaagcgacgttga
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