Primulina tabacum: 142552345
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Entry
142552345 CDS
T11246
Name
(RefSeq) uncharacterized protein LOC142552345 isoform X1
KO
K14306
nuclear pore complex protein Nup62
Organism
ptab Primulina tabacum
Pathway
ptab03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
142552345
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptab03019
]
142552345
Messenger RNA biogenesis [BR:
ptab03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
142552345
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Nsp1_C
DUF4854
COG3_N
Spectrin_1st_PEPL
FapA
Motif
Other DBs
NCBI-GeneID:
142552345
NCBI-ProteinID:
XP_075518213
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Position
1:56265389..56273344
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AA seq
878 aa
AA seq
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MAGTGFGFSTTSSFSSSSSSPSPFSFGFSNPSSNPTSTTSAISFGVGSGTASSTTGSSAT
PFGGSSIFGSSPALASNLFGSSTGAGLISNTFGSSSASGSTPTSKFFGSGTTPSSFGSSA
SASTSNFFGSSLSGSAPTTNIFGSGSAPSMFGSSSTAASTSSPFGSSLSGSASSSNFFGS
VPAPNILGSSSAAPASIPFGSPSLGTGNTANVFGSSSAAVAGSPSPSSSPFGTSTLFASP
APGSSNLSGSSNAPTSNPFGFFSGASNSSTTTPSFGSGLAASSNLFGSSLSSSNTANTAP
LSESGPIPALNVFDGKFPAGGLFAPSTPSFPTNVASVGNTPSFGSSSGSSLGLLGSSSSM
FSSSPVTLFGSLSSSSSATSSPLPTNASSSASSASGFSFATASSSLGNAPLFGSSSASTL
GLTGSSSSIFSSSPAPLFGSSSSFTTATSFPAPTNASSSASSAPGFSFASASGSPGFSFP
AASAAGLGTAATTPAASFSTAPTSVSSGFSFLKSTTSLASGAASSSTLPSFGTTGFQSST
LTSPLSSVPTSKATAAGTTPSATTASFLSAATASSTASSGFTGFGGASAPALSSGASSAF
SLSLKSPIAASSVSSQPQSVSTLPSQGAQGVASTTPISSTAGSSAQTTSSLVVSSSSGTT
STTSTALASAPKLPSEITGRTVEEIIKEWNAELQERAGKFQKQANAIAEWDRRILQNRDI
LLTLESEVAKVVKTQDSLERQLELIETYQDEVDKALESMEEEAERIYSEERGLLLDDEAA
STRDAMYEQAEMIERDLEHMTEQIKSIINSINANKGGELDATDGMTPLDVVVRILNNQLS
SLMWVDEKAEEFSSRIQKLANQSSATEHELTRPKLWLN
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atggcggggacgggctttggcttctccacaacttcctcattttcatcttcttcgtcgtcc
ccttctcccttttcgtttggcttttcaaaccctagttcaaaccccacctcaaccacttcc
gcaatttccttcggcgttgggtcgggaacggcatcttccaccaccgggtcatctgcaacc
ccattcggaggttcctcaatcttcggctcgtcgcctgccctcgcctccaatttattcggg
tcttctaccggtgcaggcctcatatcaaatacatttggatcatcttctgcatcaggttcg
actccaacatccaaattttttggatctgggacgactccgagctctttcggatcttctgct
tcagcaagtacttccaatttctttggatcctctttatctggttcggcgccaacaacaaat
attttcggttcgggttctgcacccagcatgtttgggtcttcttctacagcggcttccacc
tctagtccttttggttcatcattatctgggtcagcctcctcttcaaacttttttggatca
gtgccagctcccaacattttggggtcctcttctgcggctcctgcttcaattccttttgga
tccccatctttgggtacgggtaatactgctaacgtgtttgggtcgagttctgctgctgtg
gccggatcaccatcgccttcatcatcaccatttggtacctcaacattatttgcatcccct
gctccgggatcttcaaacttatctgggtccagcaatgccccaacttctaaccctttcgga
tttttctctggagcttctaatagcagtaccaccacaccgtcgtttggatctggtctagcc
gcatcgtccaacctattcggatcgtctttatcatcatcaaataccgcaaacactgctccc
ctgtccgagtcaggtccaatcccagcgttaaatgtgtttgatggtaagttcccagctgga
ggcctattcgccccctccacaccttcatttccaacaaatgtagcatcagtgggaaataca
ccatcgtttggatcaagctctggatcaagtttaggccttttgggttcctcttcgtccatg
tttagttcttctccagttaccttgttcggttcgttaagctcttcctcctcagctacatca
tccccattacctaccaatgcttcaagctcagcttcttcggcatctggattttcatttgcc
actgcatctagttctctcggaaatgcaccattatttggatcaagttctgcgtcaacttta
ggtcttacgggttcctcctcatccatctttagttcatctccagctcccctgttcggttca
tcgagctctttcaccacagctacatcattccccgcacctaccaatgcttcaagctcagct
tcttcagcacctggattttctttcgccagtgcatctggttctcctggattttcgttccct
gcagcatcagctgctggcctgggaactgctgctactacacccgctgcttcattttcaaca
gcgcctacttctgtttcttctggtttttcatttttaaagagcactaccagtttagcatca
ggagcagcttcatcatcgactttgcccagttttggcactacagggtttcaatcctccact
ttaacatcgcctctctcaagtgtgcccacatcaaaagccactgcagctggtaccacccct
tcagctacaactgcttcatttctatctgctgctaccgcatcttctactgctagttctggt
tttacgggtttcggcggtgctagtgcgcctgcattgtcatctggagcttcaagtgccttc
tctttatctttgaaatcacccatagctgcatcctcagtgtcatctcaaccacaatcggtt
tctactctgccttctcaaggtgctcaaggtgtggcttcaacaactccgataagttcaact
gccggttcttctgctcaaacaacatcatcccttgttgtatcttcaagtagtggaactact
tcaacaaccagtacagcattagcctctgcacccaagttaccgtctgaaattactgggaga
actgttgaggagatcatcaaggaatggaatgctgaactacaggagcgggctggaaaattt
cagaagcaagctaatgcaatagctgagtgggaccgtaggattttgcagaatcgtgatatt
cttctcacacttgagagtgaagttgcaaaagttgttaagacccaggatagtttggagcgg
cagttggagctaattgaaacttatcaagatgaggttgacaaagccttggaaagtatggag
gaagaagccgagcgtatatacagcgaggagcgtggattactgcttgatgacgaggctgca
tctaccagagatgcaatgtacgagcaggctgaaatgatagaacgagacctggagcatatg
actgaacagattaaatctattatcaattctattaatgccaacaaaggtggagagcttgat
gccacggatggaatgactccactggatgtcgttgttcgtatcttaaacaaccaactgagt
tcattgatgtgggttgatgaaaaggcggaggaattctcttcacgtatccagaagctcgca
aaccagagttcagctacagagcacgaattgacgcggccaaagctatggttgaattga
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