Primulina tabacum: 142552582
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Entry
142552582 CDS
T11246
Name
(RefSeq) nuclear pore complex protein NUP54 isoform X1
KO
K14308
nuclear pore complex protein Nup54
Organism
ptab Primulina tabacum
Pathway
ptab03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
142552582
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptab03019
]
142552582
Messenger RNA biogenesis [BR:
ptab03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
142552582
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
Cmyb_C
Motif
Other DBs
NCBI-GeneID:
142552582
NCBI-ProteinID:
XP_075518381
LinkDB
All DBs
Position
8:121130..127037
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AA seq
363 aa
AA seq
DB search
MFGAQSSSSATTAFGTPGFGTSLFSTPFSQQSHPQHQQTPSIFQTPQLQQQLQTPSIFQT
PQPQQSSGTPFGLENPFNTAAQSQVTPFTNASPAFQFSNSQLTTQMAPVAPLPFSLPDRD
IQAIVDAYKEEHGNPKYAFKHLLYSVTEPQQRIKPAGVSDILWADAMGKLEGMESSLWPQ
LVQGFKDLSNRLKLQDEVILSDSERLRMTQNNVKMLQRHFQADTLPWIQRMQQKEQGLQR
RLLRLMRIIESLEGKGCRLPLMKGEAELAEKLAMITRQLKGSGAELVRRVQNLLALSRLQ
ADGLNGGSLYFPGSTKIHEQSLAEMQEMLQQQIVAIAGLGNVLKRDIRDTEIIMAEDTEM
SQD
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atgttcggagcgcagtcctcgtcctccgccaccacggccttcggcactcctggatttggg
acatcgctcttttcgacacctttctctcagcaatctcatcctcagcaccagcagactcct
tcgatatttcagactcctcaactgcagcaacagctgcaaactccttcgattttccagacc
cctcagccacagcaaagctccggcacccctttcggattggagaatccatttaacaccgcc
gctcaatcgcaggttactccttttactaatgcttcgcctgcatttcagttttctaattcg
cagcttactacgcaaatggcccccgtcgcccctctcccattctcactccctgatcgtgat
atccaagccattgtggatgcgtacaaggaagaacacgggaaccccaagtatgcctttaag
catctattgtatagtgtgactgaacctcagcaaaggataaagcctgcaggtgtatcagat
attttgtgggcagatgcaatggggaagctggaaggcatggaaagttccctatggccccag
cttgtgcaggggtttaaagatctttccaaccgtctcaagcttcaagacgaagtcattctt
tcggattcagagagactgaggatgactcagaacaatgtcaagatgctccaaaggcatttt
caagctgacacccttccttggattcaaaggatgcaacaaaaagagcaaggtctacagagg
cgccttttgaggttaatgagaataatcgagtcacttgagggtaaaggctgtagattgcct
ctaatgaaaggggaagcagaattggcagagaagctggctatgattacaagacagttaaag
ggatctggagcagaactagtgagaagagtccagaatctgcttgctttatcccgccttcaa
gcggatggcctaaatggtggctcgctttattttccaggatcaaccaaaattcatgaacaa
agtcttgccgagatgcaggagatgttgcaacagcagattgtggctattgctgggcttggc
aacgtgctaaagcgtgacatacgagatacggagattataatggctgaagatacagaaatg
tctcaggactaa
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