Primulina tabacum: 142552657
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Entry
142552657 CDS
T11246
Name
(RefSeq) chaperonin 60 subunit beta 4, chloroplastic-like isoform X1
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
ptab Primulina tabacum
Pathway
ptab03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
142552657
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptab03019
]
142552657
03110 Chaperones and folding catalysts [BR:
ptab03110
]
142552657
03029 Mitochondrial biogenesis [BR:
ptab03029
]
142552657
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ptab04147
]
142552657
Enzymes [BR:
ptab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
142552657
Messenger RNA biogenesis [BR:
ptab03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
142552657
Chaperones and folding catalysts [BR:
ptab03110
]
Heat shock proteins
HSP60 / Chaperonin
142552657
Mitochondrial biogenesis [BR:
ptab03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
142552657
Exosome [BR:
ptab04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
142552657
Exosomal proteins of other body fluids (saliva and urine)
142552657
Exosomal proteins of breast cancer cells
142552657
Exosomal proteins of colorectal cancer cells
142552657
Exosomal proteins of bladder cancer cells
142552657
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
142552657
NCBI-ProteinID:
XP_075518527
LinkDB
All DBs
Position
8:709476..713725
Genome browser
AA seq
585 aa
AA seq
DB search
MGSSLRPLPAVGFACQSRIPNTIIRRPHISMLTATASAKHVYFNHDGSATRKLLAGVDKV
AELIGVTMGPKGRNVVLQNKYGPPKIVNDGETVLKEIELEDPLENVGVKLVRQAGARTND
LAGDGCTTSIVLARGLIAEGVKVIAAGMNPVQISRGIEKTARALIPELKLMSKEVEDHEL
ADVAAVSAGNDYTVGNMISTALRRVGRSGFITIEKGNYAENNLEIVEGMQFDRGYLSPYF
VTDRQKMTVEFHDCKLLLVDRKIINPRELFKILDDAVKEKYPIVLVAEGIEQEALAPVIR
NKLRGVLKVAAIKAPAFGVRKSHYLDDIAILTGGTVIRDDMGLTLENAHRDMLGSASKVA
ITKDSTLIVTDGSTQDAVKERVSQIQRLVENTAEKFQKKILNERIARLSSGIAILQVGAQ
TVVELKDKQLRVEDALNATKAAIEEGVVVGGGCCLLRLSTKIDSIREQLDNEEQKIGADI
LKRALMYPARQIAKNAGVNGNTVIEKILSSGDLRYGYNAAKGKYEDLMAAGILDPTKVVR
CCLEHASSVAKTFLTSGAVVIEIKDPVSRHIRKPMPTSGVGPVSI
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgggaagttctctcaggccattgccagcagttggcttcgcatgtcagtcgcggataccc
aatacaattataaggagacctcatatttccatgttgactgcaactgcctcggccaaacat
gtctactttaatcatgacggttcagccacaagaaaactcctggcaggggtggataaagtg
gcagagctgattggggtaacgatgggtccaaagggaaggaatgtggtgctgcagaacaag
tatggacctccaaagatagtaaatgatggggaaactgttcttaaagagattgagctggaa
gatcctctagaaaatgttggtgtaaaactggtgagacaagctggagctaggacaaatgat
cttgccggtgacggctgcactacatctatagtgcttgctcgtggtcttatcgccgagggc
gtgaaggttattgcagcgggtatgaacccagttcaaatctcacgaggaattgagaaaacg
gctagagccctcatacctgaactcaaattgatgtccaaagaggttgaggaccatgaactt
gctgatgttgctgccgttagtgcaggaaacgattatacagtgggaaatatgatttctact
gctcttcgacgagtaggaagaagcggttttataacaattgagaaagggaattatgctgaa
aataatctagaaattgttgaaggaatgcagtttgaccgaggatacttatctccttatttc
gtcactgaccgtcagaagatgactgtggagtttcacgattgcaaattgcttttggttgac
agaaagattataaatccaagagagttgttcaagatattggatgatgccgtcaaagaaaaa
tacccaattgtcttagtagcagagggaatcgagcaagaagctctggcacctgtaattcgg
aacaaactgaggggagttttgaaggtagctgcgattaaagctccggcctttggcgtgcgg
aagagccattatctggatgacattgctatcttgacaggaggaacggtaatcagggatgat
atgggattgacccttgaaaatgcacatagagatatgttggggtctgcttctaaagtcgca
ataacaaaagactcgacgttaatagtgacagatggaagcactcaagatgctgtgaaagag
agagtttctcagattcaaaggcttgtcgagaatactgcggaaaaatttcagaagaaaata
ttgaatgaacggatagcgaggttatcaagtggtatagcaattcttcaggtgggagcacaa
actgttgtcgagttaaaggataaacaacttagagttgaagatgctctaaatgcaactaag
gctgcaattgaggaaggagtagtagttggcggtggttgttgcctactaaggctgtccacg
aagattgacagtattagagaacagttggataatgaagagcaaaaaattggagcagatata
ttaaaaagagctttgatgtaccctgcaaggcagattgcaaaaaatgctggtgtaaatggg
aacactgttattgaaaagattctgtcatcaggtgacttaaggtatggatataatgctgca
aaaggcaaatacgaggacttgatggctgctggaatcttggatcctactaaggttgttcgt
tgttgcttggagcatgcatcctctgtggctaagacgtttttgacatcgggtgcagttgtc
attgaaattaaggatcctgtttccagacatatcaggaaaccaatgccaacatcaggcgtt
ggaccggttagcatttag
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