Primulina tabacum: 142552891
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Entry
142552891 CDS
T11246
Name
(RefSeq) coatomer subunit alpha-1-like isoform X1
KO
K05236
coatomer subunit alpha
Organism
ptab Primulina tabacum
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ptab04131
]
142552891
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ptab04147
]
142552891
Membrane trafficking [BR:
ptab04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
142552891
Exosome [BR:
ptab04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
142552891
Exosomal proteins of bladder cancer cells
142552891
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
WD40_Prp19
Beta-prop_THOC3
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_2nd
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_1st
EIF3I
WD40_Gbeta
TPR_COPA_B
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
ANAPC4_WD40
Beta-prop_WDR41
Beta-prop_DCAF4
Beta-prop_SPT8
Beta-prop_IFT122_1st
Beta-prop_Aladin
NBCH_WD40
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Fis1_TPR_C
Motif
Other DBs
NCBI-GeneID:
142552891
NCBI-ProteinID:
XP_075518889
LinkDB
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Position
8:complement(2492019..2497710)
Genome browser
AA seq
1219 aa
AA seq
DB search
MLTKFETKSNRVKGLNFHGKRPWILASLHSGVIQLWDYRMGTLIDRFDEHEGPVRGVHFH
KSQPLFVSGGDDYKIKVWNYKLHRCLFTLLGHLDYIRTVQFHHECPWIVSASDDQTIRIW
NWQSRTCISVLTGHNHYVMCASFHPKEDLIVSASLDQTIRVWDIGALRKKAVSPADDILR
LSQMNADFFGGVDAVVKYVLEGHDRGVNWASFHPTLPLIVSGADDRQVKIWRMNDTKAWE
VDTLRGHVNNVSCTLFHARQDIIVSNSEDRSIRVWDATKRTGLHTFRRELDRFWILSVHP
EINLLAAGHDSGMIVFKLERERPAFSVSVDSVFFVKNRFLRVFEYSTQKDVQLITIRRPG
SHGLNQGARTLSYSPTENAVLICSDVDGGSYELYVIPKDSYGKSDTVQEAKRGAGGSAVF
VARNRFAVLEKSSNQVLVKNLKNEIVKKSVLPIATDAIFYAGTGNLLCRAEDRVVIFDLQ
QRNVVGDLLTPFVRYVVWSLDMASVALLSKHSVVVADKNLVHCCTLHETIRVKSGAWDDN
GVFIYTTLTHIKYCLLNGDSGIIKTLDVPVYITKIHGNSIFCLDREGKNRPIIIDSTEYI
FKLSLLGKRYDQVMSMIKNSELCGQAMIAYMQQKGFPQVALYFVKDERTRFNLALECGNI
EKALESAKKIDEKDHWYRLGVEALRQGNAGIVEYAYQKTKNFERLSFHYLITGNLEKLSK
MMRIAEVKNDVMGQFHDAVYLGDIRERVKILENAGHLPLAYFTATVHGLHDVAGRIGVEL
GDNIPHLPKVNNPALLIPPNPVLCAGDWPLLMVGRGIFEGGLDDTAKGGNDDYEDAADAD
WGEGLDIDEVDKIQNGDGSVLLKDDDENENEENEEGGWDLEDLDLPPDADTPKTTPKSRS
SVFVAPAPGMPVSQIWVQRSSLAAEHAAAGDFDTAMRLLSRQLGIRNFSPLKSLFIDLHM
GSHTYLRALSSAPVVSVAVERGWSESASPNVRGPPALVFNFSHLDEQLKAGYKATTAGKF
SEALRHFLAILHTIPLIVVETRREVDEVKELIIIVKEYVLGLKMELKRRDLKDNPIRQQE
LAAYFTHCNLQLPHTRLALLNAMTVCYKAQNLSTAVNFAYRLLETNPSNENQARTARQVL
LAAEKNMKDSAQLNYNFRNPFVICGATYVPIYRGQRDVSCPYCSTHFVPSQQGQLCMVCD
LSVVGSDASGLRCSPSQTR
NT seq
3660 nt
NT seq
+upstream
nt +downstream
nt
atgttgacgaagtttgagacgaagagtaatagagtgaaagggttgaatttccacggtaag
aggccatggatcttggcgagtcttcacagtggtgtgatccaactctgggactatcgcatg
ggcaccctcattgatcggtttgatgagcatgaaggacccgttcgtggtgttcattttcac
aagtcacagccgctttttgtatccggaggtgacgattacaagattaaggtctggaattac
aaattgcataggtgtctatttactcttcttggtcatcttgattatatccggacggttcag
tttcatcatgagtgtccctggatcgtcagtgcaagtgatgatcagacaattagaatatgg
aattggcagtcccgaacttgcatatctgtgttgactgggcacaatcattatgtcatgtgt
gcatcatttcacccgaaagaagacttgattgtttcagcatcattagaccagactattcgt
gtatgggatattggtgccttgaggaagaaagcggtatctcctgccgatgacatactgcga
ttgtcacaaatgaacgcagatttctttggtggggtcgatgctgttgtgaagtatgtcttg
gaaggccatgatcgaggggttaactgggcttctttccatcctactcttcctcttattgtt
tccggagcagatgaccgacaagttaaaatatggcgcatgaatgatacgaaggcttgggag
gtggacacattaagaggccacgtgaataatgtatcctgtactttgtttcatgcaagacag
gatatcattgtttcaaattctgaagacaggagtatcagagtttgggatgcaacaaaaaga
actggcttgcatacttttcgtagggaacttgaccgattctggatcctatcagttcatcct
gagataaatctcttggctgctggtcatgatagcggcatgattgtttttaagttggaaaga
gagcgtcctgccttttctgttagcgttgattcagtcttctttgtcaagaacagatttctc
cgtgtatttgagtattcaacacagaaagatgttcaactgataacgattcgccgacctggt
tctcatggtttgaatcaaggggctcgaactctttcttacagccctactgaaaatgctgtt
ttgatttgctcagatgtggatgggggatcatatgagctctatgttattccaaaagacagc
tatggtaaaagcgacacagttcaggaggcgaagagaggtgctggggggtcagcagtattt
gtggctcgaaatagatttgctgtgcttgagaagagcagcaatcaagtattggtcaagaac
ctgaaaaatgaaatagtgaaaaagagtgttcttccaattgctactgatgctatattctat
gccggaacgggaaatctactctgcagggcagaggacagggttgtcatatttgatctccaa
caaaggaatgttgttggggatcttctaactcctttcgttaggtatgtggtatggtctctg
gatatggcttccgttgctttattgagcaagcactctgttgttgttgctgataaaaacctt
gtgcattgctgcactcttcacgagaccattcgtgtcaagagtggagcatgggatgataat
ggagtcttcatctatacaacactgacgcatatcaagtattgccttctaaatggggatagt
ggaattatcaagacattagatgttccagtatatattacgaaaatacatgggaactcaata
ttttgcttggatcgagaggggaaaaaccgtcctatcattattgattcaacagagtatatc
ttcaagctatccttgctgggaaagagatacgaccaagtgatgagcatgataaaaaactca
gaactatgtggacaggcaatgattgcttatatgcaacaaaagggcttcccacaggttgct
ctttattttgtgaaggatgaaaggactcgcttcaacttagccctggaatgcggtaatatt
gaaaaagcccttgaatctgcaaaaaagattgatgaaaaagatcactggtacagactagga
gtggaggcacttcgtcagggaaatgctgggattgttgaatatgcataccagaagacaaaa
aacttcgagagactatcttttcattatctgataaccggtaatctcgaaaaattatccaaa
atgatgagaattgccgaggtcaagaatgatgtcatgggtcaatttcatgatgcagtctat
cttggagatattagggagcgtgttaagattctggagaatgcaggccatctgcctcttgca
tattttacagccactgtgcatgggctccatgatgttgcagggcgtataggtgtagaactt
ggggataatattccgcatttgcccaaggtgaataaccctgctctattgatacctccgaat
ccggtgttatgtgcaggagattggcctttgttaatggttggtagaggaatttttgagggt
ggtcttgatgatacagccaaaggtggaaatgatgattatgaagatgctgcagatgctgat
tggggcgaaggtttggatattgatgaggtggacaagatacagaatggagacggtagtgtg
ttgttgaaggatgatgacgagaatgagaatgaagagaatgaagagggaggatgggatctc
gaggacttggatctgcctcctgatgctgacacaccaaagacaaccccaaaatcacgttca
tcagtttttgtagcccctgcccctggaatgcctgtgagccagatttgggtccaaagatca
tcacttgctgctgaacatgctgctgctggggactttgacacagcaatgcgtctattgagc
cgtcagttaggaatacgaaatttctcacctttgaagtcgctatttattgatcttcacatg
ggcagccacacgtacttgcgtgccttatcatcagccccagtggtctctgttgcagtggaa
aggggttggagcgagtcagcaagtccaaatgtgcgggggccccccgctctggtgtttaat
ttttctcacttggatgaacaactcaaggctggttataaggctacgaccgctggaaagttt
tcagaagctcttcgacatttcctagctattcttcacacaattccactgattgtggtcgaa
acacggagagaggttgatgaagtgaaagagttgattatcattgtaaaagagtatgttttg
ggtttgaagatggagcttaagagaagggatttgaaggacaatccaattcgtcagcaagag
cttgcggcctatttcacccattgcaacctccaacttccacacactcgacttgcattattg
aacgccatgactgtttgctacaaggcgcaaaatctgagcactgcggttaactttgcttac
cgacttctggaaaccaacccaagcaacgaaaaccaagccagaacagctcgacaggttcta
ctggctgccgagaagaatatgaaagattctgcacaactgaactacaattttagaaatcct
tttgtaatatgtggggccacttacgtcccgatatacagagggcagagagatgtaagttgt
ccttactgcagtacccattttgttccgtctcagcaagggcagctttgtatggtttgtgac
ctttctgtggttggatctgatgcatctggcttgcgctgttctccttcacagaccagatga
DBGET
integrated database retrieval system
