Primulina tabacum: 142552917
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Entry
142552917 CDS
T11246
Name
(RefSeq) vacuolar protein sorting-associated protein 35B-like
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
ptab Primulina tabacum
Pathway
ptab04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
142552917
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ptab04131
]
142552917
Membrane trafficking [BR:
ptab04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
142552917
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
Motif
Other DBs
NCBI-GeneID:
142552917
NCBI-ProteinID:
XP_075518944
LinkDB
All DBs
Position
8:2661374..2672155
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AA seq
809 aa
AA seq
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MCHILHCSNWNQLRIGRSKTMLNGIDDEEKWLAEGIAGIQHNAFYLHRALDSNNLREALK
FAAQLLSELRTSKLSPHKYYELYMRAFDELRRLEMFFKDEDRHGCSVVDLYELVQHAGNI
LPRLYLLCTVGSVYIKSKQAPAKHVLKDLVEMCRGVQHPLRGLFLRSYLAQVSRDKLPDI
GSEYEDEGDTVMDAVEFVLQNFTEMNKLWVRMQHQGPLREKEKLEKERNELRDLVGKNLH
VLSQIEGVGLEIYRDSVLQRVLEQVVNCKDELAQYYLMDCIIQVFPDEYHLQTLETLLGA
CSQLQPVVDIKTVLSQLMDRLSTYAASSPEILPEFLQVEAFSKLSTAIGKVIEAQIDMPI
VGAISLYVSLLTFTLRVHPDRLDYVDQVLAACVKKLSGKPKLEDSKATKQVVMLLSAPLD
KYNDTVTALTLSNYPRVMDHLDAGTNKVMAMVIIRSIMKNKTSVSSSDKVEVLFELIKGL
MKDLDGIQTDELDEEDFNEEQNSVAGLMHVLYNDDSEEMLKIIYTVWKYISVGGPKRLPF
TIPPLVFSALKLVRRLHGQDGDVAGEEVPATPKRIFQLLNQVIEALSVVPSPELALRLCL
QCAEAANDCDLEPVAYEFFTQAFVLYEEEIADSKAQVTAIHLIIGTLQRMNVFGVENRDT
MTHKATGYSAKLLKKPDQCRAVYACAHLFWVDDQDGIKDGERVLLCLKRSLRIANAAQQM
ANVTRGSSGPVTLFVEILNKYLYFFEKGNPHITGGLIQSLVELIKTEMQSDSTTPNQASD
NFFTSTLRYIQFQKQKGGAMGEKYSPITA
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atgtgtcatattcttcactgttccaactggaatcagttgagaatcggaagaagcaaaacg
atgttaaacggaatcgacgacgaggagaaatggctcgcagaaggcatcgccggaattcag
cacaacgccttctatttgcatcgagctttggactcgaataacctcagagaagcgttgaaa
ttcgccgcgcagttgttgtctgagctacgaacgtcgaagctctcgcctcacaaatattac
gagctttatatgcgagcttttgatgagttgaggaggctggaaatgttcttcaaggacgaa
gatcggcacggttgttcggtggttgacctttacgaactggttcagcacgctgggaacatt
ttacctaggctgtatctcttgtgtacagttggatctgtttacataaagtcaaaacaggct
cctgctaagcatgttttgaaggatcttgttgagatgtgtcgtggagttcaacatccatta
cgtgggctctttttgaggagttaccttgctcaagttagcagagacaagttgccagatatc
ggttcagagtatgaagatgaaggtgacactgtcatggatgctgtcgaatttgtccttcaa
aatttcaccgagatgaataaactttgggtacggatgcaacatcagggacctctgagggag
aaagagaagcttgaaaaggaaaggaacgaactacgcgatcttgttgggaaaaatttacac
gttctcagtcagatagagggtgttggccttgaaatatatagagacagtgttcttcagaga
gtgttggagcaggttgttaattgtaaggatgaacttgcccagtattatctgatggactgc
ataattcaggtctttccagatgagtaccatttgcagacccttgagacattattgggtgcc
tgctcccaacttcagccggtggttgacatcaaaacagttttgtcacaattgatggataga
ttgtcaacctatgctgcttcaagtcctgaaatattaccggagtttttacaagttgaagca
ttttccaaactgagcactgccattggaaaggtcatcgaagcacagattgacatgccgata
gttggtgcaatttctttatatgtctcccttctgactttcactcttcgtgtacatcccgat
cgtctggactatgtcgatcaagtgctggcagcatgtgtcaagaaattatccgggaaacca
aagcttgaggatagtaaagccacaaaacaagttgttatgcttctgagtgctccgctagat
aaatacaatgatactgtcacagctcttactctctcaaattatccccgtgtcatggatcac
cttgatgctggaacgaataaagttatggcaatggttattatcagaagcattatgaaaaat
aagacttctgtatcaagttctgacaaggttgaggttctatttgaactgattaaaggactt
atgaaagatttagatggaattcaaacagatgagcttgatgaagaggatttcaacgaggag
caaaactctgttgccggcctcatgcatgtgttgtataatgacgactcggaagaaatgtta
aagataatatatactgtgtggaaatatatatcggttggaggtcccaaacgcttacctttc
accatcccacctcttgttttttctgccctcaagttggttagaagattgcatggtcaagat
ggggatgtagctggagaagaagttcctgctactccaaagagaatttttcagctcttgaat
caggttattgaggctctttcagttgttccatcacctgaattggcattgagactgtgcttg
caatgtgcagaggcagctaatgactgcgatcttgaaccagtggcttatgagtttttcacg
caagcttttgtgctatatgaggaagaaatcgcggattctaaagcccaggtaactgccata
cacctaattattgggacacttcagagaatgaatgtatttggtgttgagaacagagacacg
atgacacataaggctaccgggtattcagccaaacttttaaagaagcctgatcagtgtaga
gccgtttatgcttgtgcgcatctgttctgggttgatgatcaggacggcatcaaagatgga
gaaagggttttactttgcttaaagcgttccctaaggatagcaaacgctgctcaacagatg
gcaaatgttacaaggggtagcagtggacctgtgacgctctttgttgaaatactcaacaag
tacctatattttttcgaaaagggaaaccctcatataactggtggtctcattcagagcctt
gtagagttaatcaagactgagatgcagagtgacagcacaactccaaatcaagcttccgat
aattttttcacgagcacattacgctacattcaattccaaaaacaaaaaggcggtgctatg
ggtgagaaatacagtccaattacggcgtga
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