Primulina tabacum: 142553091
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Entry
142553091 CDS
T11246
Name
(RefSeq) serine/arginine-rich splicing factor RS40-like isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
ptab Primulina tabacum
Pathway
ptab03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
142553091
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ptab03041
]
142553091
Spliceosome [BR:
ptab03041
]
Common components
Common spliceosomal components
SR proteins
142553091
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RNA_bind
Nup35_RRM_2
RRM_5
DUF2129
SET_assoc
RRM_Nup35
RBD_RDR6
Motif
Other DBs
NCBI-GeneID:
142553091
NCBI-ProteinID:
XP_075519202
LinkDB
All DBs
Position
8:complement(3860814..3917831)
Genome browser
AA seq
260 aa
AA seq
DB search
MCTDLRMMRGIFCGNLEFDAHQSDVERLFRRYGKVERVDMKSGFAFVYMEDERDAEDAVR
KLDRTEFGRKGHRLRVEWTKQERGGRRSSDSLRKPSINTKPSKTLFVINFDPIHTRTSDL
ERHFEHYGRVSNVRIRRNFAFVHYELQEDATRALEATHMSKFMDRVISVEYAIRDDDDKR
NGYSPDRRGRDLFPDRRNYGRGHSPNDYRRDRDSPDYGHGSVPNPRSERRESPDYGRAER
PAKDKYRSRSPPHERSPSQE
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgtgtacagatctcaggatgatgaggggcatattttgtgggaatctggagtttgatgct
caccaatccgatgttgaacgccttttcagaagatatggaaaggttgagagggtggatatg
aaatctggctttgcttttgtctacatggaagatgagcgagatgcagaggatgcagtacga
aaactcgacaggacagagtttggtagaaaaggacatcgacttcgcgtcgagtggactaag
caagaacgaggtggcaggaggtcctctgatagcttgagaaaaccttcaatcaacaccaaa
ccttcaaaaactttgtttgtcatcaactttgatcccatccataccaggacaagcgatctc
gaaaggcattttgaacattatggaagggtatcaaatgtaagaatcagaaggaattttgca
tttgtgcattatgaattgcaggaagatgccacacgagcattagaagctactcatatgagt
aaattcatggatcgagtaatttctgttgagtatgccattcgagatgacgatgacaagaga
aatggatacagccctgatagaagaggtcgagatttgttccctgatagaagaaactatggt
cggggacattccccaaatgattatcgcagggacagggatagccctgattacggacatgga
tctgttccaaatcctagatctgaacggagggagagtcctgattatggcagggcagaacgc
ccagccaaggacaagtatcgaagccgttcgcctcctcatgaaagatctccatctcaagaa
tga
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integrated database retrieval system
