Primulina tabacum: 142553174
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Entry
142553174 CDS
T11246
Name
(RefSeq) ATP-dependent Clp protease ATP-binding subunit ClpA homolog CD4B, chloroplastic-like
KO
K03696
ATP-dependent Clp protease ATP-binding subunit ClpC
Organism
ptab Primulina tabacum
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
ptab03110
]
142553174
Chaperones and folding catalysts [BR:
ptab03110
]
Heat shock proteins
HSP100
142553174
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
Clp_N
AAA_lid_9
AAA
ClpB_D2-small
AAA_5
AAA_16
Sigma54_activat
UVR
AAA_22
nSTAND3
TniB
NBD_SMAX1
AAA_14
AAA_28
AAA_18
NACHT
Mg_chelatase
Zeta_toxin
IstB_IS21
AAA_25
Torsin
Motif
Other DBs
NCBI-GeneID:
142553174
NCBI-ProteinID:
XP_075519335
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All DBs
Position
8:4582951..4587079
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AA seq
923 aa
AA seq
DB search
MSHALVQSTNLPSAGLTKNGKFRGSSKTNGAVTMLCGYQTTPLQMRNFSGLRGVNTLDMM
VRQIGQTLQSRAAAATFGRRGRKLRMAPRAMFERFTEKAIKVIMLAQEEARRLGHNFVGT
EQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLEL
SLEEARQLGHNYIGSEHLLLGLLREGEGVAARILENLGADPSNIRTQVIRMVGESAEAVG
AGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQGQIERVTQILGRRTKNNPCLIG
EPGVGKTAIAEGLAQRIANGDVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEI
KQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPALSRGELQCIGATTLDEYRKHIEKDP
ALERRFQPVKVPEPTVDETIQILRGLRERYEIHHKLRYTDGSLVAAAQLSYQYISDRFLP
DKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRSQDFEKAGELRDREMD
LKAQISALVDKNKEMTKAENEAGDTGPVVTEADIQHILSSWTGIPVEKVSTDESDRLLKM
EETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFVFSGPTGVGKSELAKALAAYY
FGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKA
HPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKD
SSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKVKEI
ELQVTERFRDRVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAGDIKEGNSVIVDVDSD
GNVVVLNGSNGAPPEPAPEPVVV
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atgtcacatgctttggtacagtctaccaatttaccttcagctggtttgacaaaaaatgga
aagttcaggggatctagtaaaacaaatggagcagttactatgctgtgtggttatcaaaca
actcccttacagatgaggaatttctcaggattgcgtggagttaataccttagacatgatg
gttcgacaaattgggcaaacacttcagtccagggcagcagccgcaacctttggcaggcga
gggagaaaattgcgaatggcaccacgagccatgtttgagcgattcacagaaaaagcaata
aaagtcataatgcttgcacaagaggaggcaagacggcttggacataattttgttggaaca
gaacagatattattgggacttattggggagggcactggaattgctgccaaggtcctcaag
tccatgggcataaatttgaaagatgcccgtgtggaagttgaaaaaataattggacggggt
agtggatttgttgctgtggaaataccttttactcctcgcgcgaagcgggttttggaactc
tcattagaggaagcccgccagcttggtcacaattacattggatcagagcacttgctcctg
ggattgcttcgtgaaggtgaaggtgtggcagcacgaattcttgaaaatttgggggctgac
ccaagtaacattcgaacacaggttattagaatggtaggtgagagtgcagaggctgttgga
gctggtgttggaggtgggagctctgggaacaagatgcctactctggaggagtatggtaca
aatcttaccaaactagctgaagagggtaaactagaccctgttgttggaagacagggccaa
attgaacgtgttacacaaattttagggcgacgcacgaagaataatccttgcctgattgga
gaaccgggtgttgggaaaacagctattgccgagggtcttgctcagagaatagccaatggg
gatgttccagaaacaattgaagggaaaaaggttataacccttgatatgggtcttcttgtt
gctgggacaaagtaccggggtgaatttgaagagaggttgaaaaaactgatggaggaaatt
aaacaaagcgatgaaattattctcttcattgatgaggtgcatactttgataggagcagga
gctgctgagggggcaattgatgcagcaaacatcttgaaacctgctttatctcgaggtgaa
ttgcagtgcattggggccactacattagatgaatacagaaagcatattgagaaggatcca
gcactagaaagaaggtttcagccagtcaaagtcccagaacctactgtggatgaaaccata
caaattcttagaggacttagagaacgctatgaaatacatcacaagcttcgttacaccgat
ggatctttagttgctgctgctcagctctcttatcaatatatcagtgaccgttttttgcct
gataaagccattgacttgattgatgaagctggttctcgggtccgacttcgccatgcgcag
ctccctgaagaagccagagagcttgagaaagagctcaggcagataacaaaggaaaagaat
gaggctgtccgaagtcaagattttgagaaggctggcgagctacgtgacagagagatggat
cttaaggcacagatatctgctcttgtggacaaaaataaggagatgaccaaggcagaaaat
gaggcaggggacacagggcctgttgtaacagaagctgacattcagcatatcctttcttct
tggacgggcatccctgtggaaaaagtgtccacagatgaatctgatcgccttctcaagatg
gaggagacactccacaagcgtgtcataggacaggatgaagctgtcaaagccataagtcgt
gctatccgtcgtgcccgtgttgggctcaaaaaccccaaccgccccattgctagcttcgtc
ttctccggtccaactggtgtcgggaagtcagagctagcaaaagctctggctgcctactac
tttggatccgaagaagctatgatccggcttgatatgagcgagttcatggagagacacact
gtttcaaagctcattgggtcacctcctggttatgttggttataccgaaggtgggcagtta
actgaagcagtcaggcgccgcccttacacagtcgttctttttgatgagatcgagaaggct
caccctgatgtcttcaacatgatgcttcaaattctggaggatggaagattgacggacagc
aaaggtaggacggtggacttcaagaacacacttttgatcatgacatcaaatgttggaagt
agtgtaatcgagaaggggggccgacgcataggctttgatctagattatgatgagaaggat
agtagttacaaccgtatcaagagtttggttacagaagagctgaaacagtatttcagacca
gaattcttaaacagattggatgaaatgattgttttccgacagcttaccaagcttgaggtg
aaggagatagccgatataatgctgaaggaggtattcgatagattgaaagtcaaggagata
gaacttcaagtgaccgaacggttcagagatagggttgtggaagaaggatacaacccgagt
tatggggcgaggcctctaagacgagccatcatgagactgttggaggacagtatggctgag
aagatgctcgccggcgatattaaagaaggcaactcggtcatcgtggatgttgattctgat
ggcaacgtggtagttctcaacggtagtaatggtgcacctccagaaccggcgcctgaacct
gtggtagtgtag
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