Primulina tabacum: 142553188
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Entry
142553188 CDS
T11246
Name
(RefSeq) SWI/SNF complex component SNF12 homolog
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
ptab Primulina tabacum
Pathway
ptab03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
142553188
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ptab03021
]
142553188
03036 Chromosome and associated proteins [BR:
ptab03036
]
142553188
Transcription machinery [BR:
ptab03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
142553188
Chromosome and associated proteins [BR:
ptab03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
142553188
PBAF complex
142553188
GBAF(ncBAF) complex
142553188
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
142553188
NCBI-ProteinID:
XP_075519365
LinkDB
All DBs
Position
8:4701418..4704755
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AA seq
540 aa
AA seq
DB search
MDNHNIHKNHNPVRGNFGFGNPGGKQMQIPMQMPLNQNQQQVPQMLPQNQPQVRPYFPGH
FQPSEPQAQAFAQGQTVQVHTQAQFMATQPQGHNNVSISSPSVSTPGSGGAGTGKRLHKP
PSRPSGGLSAQGTASPMKTMELTPAAHRGKRKVLDKSIPDKVAAIVPESALYTQLVEFES
RVDAALTRKKVEILEALKNHVRAQKILRVYLFNTYANQAQTDSVKENAESPSWTLRMIGR
ILEDGKDPALEGQVQKSSCSYPKFSTFFKKITIYLDQNLYPDNNVILWESSRSPVLHEGF
EVKRKGDKEFTAIIRLEINYCPEKFKLSEALHEVLGIEVDTRPRIIAALWHYVKTRKLQI
PGDTSSFMCDLPLRKVFGEDKLKFSMVMQKITPHLIPPGPIHIEHKIKLSGGSPAGNTCY
DVLVDIPWTLEREMSNFLANIEKNKEIENCDEAISSAIKKIHEHRRRRAFFLGFSQSPGE
FINSLIASQARDLKLASLDTNRDVEKERQAEFYHQPWIEDAVIRYLNRKTAAGSEAPGSK
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggataatcataatattcataaaaaccacaaccctgtgaggggaaatttcggttttggg
aatcctggaggaaagcaaatgcaaattccgatgcagatgcccttgaatcagaaccagcaa
caggtaccccagatgctgccccagaatcagcctcaagtcaggccctactttcctggacat
tttcaaccatcagaacctcaggcgcaggcgtttgcgcagggccaaacagttcaagtccat
actcaagcgcagttcatggccacccagcctcagggccacaataacgtcagcatttcttca
ccatctgtgtccactcctgggtctggaggggcaggaacaggaaagcgccttcacaaacca
ccttctcggccttccgggggattatcagctcagggaactgcttccccaatgaaaaccatg
gaactgaccccagctgcacatagagggaagcggaaggttctggataaaagtattcctgat
aaagtggcagcgatagtgccagaatctgctctttatactcaattggttgaattcgagtct
cgtgtagatgctgctcttacgagaaaaaaggttgagatattagaagccctgaaaaatcat
gtacgtgctcagaagatcctacgtgtatatttgttcaacacatatgcgaaccaggcacag
acagattctgtgaaggaaaatgctgaatcaccttcttggacactcaggatgattgggaga
attttagaagatggcaaagatcccgctttggaaggacaagtgcagaaatcaagctgttcc
tacccaaagttttcaactttcttcaagaaaattactatttacttggatcaaaatctgtat
ccagataacaacgtaatactttgggagagttctcgatcaccggtgcttcatgaggggttt
gaggtgaagaggaaaggagacaaggaattcactgcaattattagattggagattaattat
tgccccgaaaagtttaaactttcagaagctttgcatgaagttcttggcattgaggtggat
acacgacctagaattattgcagcactttggcactacgtaaaaactagaaaattacaaata
cccggtgacacttcgtccttcatgtgtgatctacctcttaggaaagtgtttggagaagac
aagttgaaattttccatggttatgcagaagataacacctcatttgattccacctggtccg
atacacatagagcataaaattaagctctctggtggtagtcccgctggaaatacttgctat
gatgtgcttgtcgatattccttggacattagaaagggaaatgtcaaattttttggccaac
atagagaagaacaaggagattgaaaattgtgatgaagcaatttcttcagctataaagaaa
atccatgagcatcgccgaagacgagctttctttcttggatttagtcagtcacctggagag
ttcattaattccttaattgcttctcaagccagggatttgaagcttgcttcactagatacc
aatcgcgacgtggagaaagagcggcaagcagagttttaccatcaaccatggattgaagat
gcagttatccggtacctaaatcgcaagactgctgctgggagtgaagctcctggaagcaaa
tag
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