Primulina tabacum: 142553245
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Entry
142553245 CDS
T11246
Name
(RefSeq) pectate lyase-like
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
ptab Primulina tabacum
Pathway
ptab00040
Pentose and glucuronate interconversions
ptab01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
142553245
Enzymes [BR:
ptab01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
142553245
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Pec_lyase_N
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
142553245
NCBI-ProteinID:
XP_075519484
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Position
8:5119531..5122025
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AA seq
438 aa
AA seq
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MEVAIRFRCRSLFLILSFIVLSATANNADIDDKVWKERAAAAKKAARQAYQPDPEIVTDN
LNKHVHMYEEGDNSTRRGLRKYDGACMATNPIDQCWRCDKNWARNRKKLVDCVLGFGRHT
TGGKAGKFYVVNDPSDNDLVNPKPGTLRHAVIQAQPLWITFARDMVIRLTEELIMTSNKT
IDGRGAQVHITNGAGITLQYISNVVIHNIRVHDIKKGSGGLIRDSATHYGFRTRSDGDGI
SLFGATNIWIDHVSMSNCDDGLIDAIEASTAITISNCHFTSHNEVMLFGASDSYSDDSIM
QITLAFNHFGKGLVQRMPRARYGFVHIVNNDYTNWLMYAIGGSQHPTILSQGNRFIAPQN
PFAKEVTKRDYAPESTWKNWIWKSEGDLMMNGAFFTQSGDPNHKFVGGRDTINPKPGVFA
SQLTRFSGPLDCIKKKPC
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atggaggtcgccattaggtttaggtgtaggtcgcttttcttgattttatcttttatagtt
ttaagcgcaacggcgaataatgccgatatagatgacaaagtatggaaggagcgcgcagct
gcagcgaagaaggccgctcgccaagcctatcaaccggacccggaaatagttacggataat
ctcaacaagcacgttcatatgtacgaggaaggcgacaatagcactaggagagggttaaga
aagtacgatggtgcatgcatggctacaaaccctatcgatcaatgttggagatgtgacaag
aattgggctagaaatcggaagaagttggtggattgtgttcttggattcggtcgtcacacg
acaggaggtaaagccggaaaattttatgtcgtgaacgacccgtcggacaatgatctcgta
aacccgaaaccaggaactctaaggcatgccgtgatacaagcacaaccactatggatcaca
tttgcacgtgatatggtgatcaggctgaccgaggagcttatcatgacgagcaataagaca
atagatggccgtggagcacaagtgcacattaccaatggcgcgggcataaccctacaatat
ataagtaatgtcgtaatccataatatccgagttcacgacatcaagaaaggcagtggaggc
ctcattagagattctgcaactcattatggttttcgaactagaagcgatggagatggcatt
tctctctttggcgcgacgaacatctggatcgatcacgtttcaatgtcgaactgtgacgat
ggacttatagacgccattgaggcttccactgccattaccatctcgaattgccatttcacc
agccataatgaggtaatgctgttcggagcaagtgatagttactcggacgattccataatg
caaataaccctagctttcaaccactttggcaagggattggttcaaagaatgcctcgagct
cgttacggattcgtacacattgttaacaatgattatactaattggttaatgtatgccatt
ggtggaagccaacaccctaccatactcagccagggaaatcgattcattgctcctcagaat
ccctttgccaaagaggtaaccaagagagactatgcgccagagagcacctggaagaattgg
atatggaaatctgaaggagatctcatgatgaatggggcttttttcactcagtccggagat
ccaaaccacaagttcgtgggtggacgcgacactattaatccaaaaccgggtgtattcgca
agccagctcacaagattttcgggtcctctcgattgtattaaaaaaaaaccttgttag
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