Primulina tabacum: 142553302
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Entry
142553302 CDS
T11246
Name
(RefSeq) uncharacterized protein LOC142553302
KO
K14315
nucleoporin NDC1
Organism
ptab Primulina tabacum
Pathway
ptab03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
142553302
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptab03019
]
142553302
Messenger RNA biogenesis [BR:
ptab03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
142553302
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ndc1_Nup
Motif
Other DBs
NCBI-GeneID:
142553302
NCBI-ProteinID:
XP_075519580
LinkDB
All DBs
Position
8:5670911..5675512
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AA seq
569 aa
AA seq
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MPISAAIQRTLFKDKDGGGAGGGDTRITIIKDRFLSFLIWQFLQSTCVFFIFKTIFLSPF
TAKPFTPTFLSLLSFLAIHFSLLLCSISIFFLSSPHLLPVASPIDVSLALLRLIFVPGGQ
NSSESRKKVRVWLSFTLFVSVFAVAGALFAIFICWGCDVYHIQSVSNSKTKRAGLVGNLG
FRGFIMGLFYALHYVYKQRWVLRFPIIQRPPFFSFKMGLPLAVGRALRFSTTGYLISGSL
AFFLPAEYRSQASGRKFVVEQIIFYFGSFLMIFCWELSDHLHQVLHTKRFVFAPLKGSAA
AETNPSDQLLATLEESTPKSLLQYLAYLDLCMLCESNVDTWRLAAFFEETGETYKRIIAS
CLGPLENFAKELAAGLESSSVGNSLQLSCQLTSPNNQLVVLRLSESFYDSQLFSWCARIV
SSLTARSHKEDRFGVAQLSGSNTAVISTLLASLLAVETLIGKKTNIPSEHDLIGPTGIKW
TTMNTGRRESTGNTMGKIRGSPVYAKAYALADILRSSVYLIVSAFHDEMLNSGKAGGLEK
DWIISSKPLYGTRDLLLQKLHLFLDFQAN
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgccaatctccgccgccatccaacgtacgctgttcaaagacaaggacggcggcggcgcc
ggtggaggagatacccgtatcaccataatcaaagatcgcttcttaagcttcttaatctgg
caattcctccaatctacttgcgtattcttcatcttcaagaccattttcctttcccccttc
acagcgaaaccttttactcccacttttctatcattgctttctttccttgctatccacttt
tccctactcctttgttccatctccatcttttttctttcctctcctcatctccttcccgta
gcttctcccatcgatgtttctcttgccttgctccgccttatttttgttcccggcggtcaa
aattcttcggaatcgaggaagaaggtgagagtttggttgagctttactttgttcgtgagc
gtgttcgcggttgctggggcattgtttgctattttcatctgctggggttgcgatgtttat
cacatacagtcagtttctaattctaagaccaagagagctgggttagttgggaatttgggg
tttcggggttttataatgggcctgttctatgcgttgcattatgtttataagcaacggtgg
gttttgcgcttcccgattattcagcgccctcctttctttagctttaagatggggcttcct
ctagctgtgggacgagctttaaggttttcaactactggttacttaatatctggttcactt
gcatttttcctgcctgctgagtacagaagccaagcctcagggagaaagtttgttgttgaa
cagattatattctattttggaagttttctaatgattttttgttgggaattaagtgaccac
ctacaccaggtgcttcatacaaagaggtttgtatttgctcctctaaaaggatcagccgca
gcagaaacaaatccaagtgaccagcttctagcgacacttgaggaaagcacgccaaagtct
cttttgcaatatcttgcttatctcgatctctgtatgttgtgtgagagtaatgttgataca
tggcgcctagctgcattctttgaggaaaccggtgaaacttataaaagaattatagcttca
tgtctggggcctttggaaaacttcgctaaagaacttgctgcaggtctagagagctcatca
gttggtaactcgttgcagttgtcttgtcagttaacttcgccaaacaaccagcttgtggtt
ttgagactttcagaatcattttatgattcccagcttttttcatggtgtgctcgaattgtt
tcctccttaactgcacgatcacacaaggaggacaggtttggtgttgctcaactgtcaggt
agcaatactgctgtgatctcaacattgctagctagtttgttagctgttgaaactctcatt
gggaaaaagaccaacataccatctgaacatgatctcatcggtcctactggaatcaaatgg
acaaccatgaacacagggagaagagagtcaacgggtaataccatgggaaaaataagaggc
agccctgtttatgccaaagcatatgcattggctgatattttgagaagttcagtttatcta
atcgtttctgcgtttcatgatgagatgctgaatagtggcaaagcgggaggtcttgagaag
gattggatcataagcagcaagcctctgtatggaacacgtgatcttcttctacaaaaattg
catctcttcttggatttccaggctaattag
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