Primulina tabacum: 142553308
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Entry
142553308 CDS
T11246
Name
(RefSeq) LOW QUALITY PROTEIN: ruBisCO large subunit-binding protein subunit beta, chloroplastic-like
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
ptab Primulina tabacum
Pathway
ptab03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
142553308
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptab03019
]
142553308
03110 Chaperones and folding catalysts [BR:
ptab03110
]
142553308
03029 Mitochondrial biogenesis [BR:
ptab03029
]
142553308
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ptab04147
]
142553308
Enzymes [BR:
ptab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
142553308
Messenger RNA biogenesis [BR:
ptab03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
142553308
Chaperones and folding catalysts [BR:
ptab03110
]
Heat shock proteins
HSP60 / Chaperonin
142553308
Mitochondrial biogenesis [BR:
ptab03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
142553308
Exosome [BR:
ptab04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
142553308
Exosomal proteins of other body fluids (saliva and urine)
142553308
Exosomal proteins of breast cancer cells
142553308
Exosomal proteins of colorectal cancer cells
142553308
Exosomal proteins of bladder cancer cells
142553308
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
142553308
NCBI-ProteinID:
XP_075519585
LinkDB
All DBs
Position
8:complement(5727079..5731937)
Genome browser
AA seq
604 aa
AA seq
DB search
MASIFASIGSIAAPGNRVMDEKLTGSSARFFLLASISSGSLGRQKSLLRRSRSFQVTAAA
KELLFNKDGSTIKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAREVE
LEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIE
KTAKALVSELKSMSKEVEDSELADVAAVSAGNNYEVGNMIAEALSKVGRKGVVTLEEGKS
AENSLYVVEGMQFDRGYISPYFVTDSEKMAVEFENCKLLLVDKKITNARDLINVLEEAIR
GGYPILIVAEDIEQEALGTLVVNKLRGALKVAALKAPGFGERKSQYLDDIAILTGATVIR
DEVGLTLDQADKDVLGHAAKVVLTKDYTTIIGDGSTQEAVNKRVAQIKNLIEVAEQDYEK
EKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCTLLRL
ASKVDAFKETLENDEEKVGADIVKRALSYPLKLIAKNAGVNGSVVSEKVLSSDNPKYGYN
AATGQYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPVAAGSPMDNS
GYGY
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atggcatcaatttttgcttctattggttccatagctgctccgggcaaccgggtgatggat
gagaagctcactggttcatctgctaggtttttcctccttgcttctatatcttctggttca
cttgggagacagaagagccttctacggagatcacgttcttttcaagtgacagctgctgca
aaggaattacttttcaacaaggatggctcaactataaagaaattgcagaatggggttaac
aaacttgcagatcttgttggtgttacccttggaccgaaaggaaggaatgtagtccttgaa
agcaagtatggtgccccgaaaattgttaatgatggagtgacagtggccagagaggttgag
ttagaggatcctgtggagaacattggtgctaaattggtgaggcaagctgctgcaaagact
aatgacttggctggggatggaacaacaacatctgttgtgcttgctcagggtctgatcgct
gaaggtgtcaaggtagtagcagctggtgcaaatcctgtccttatcactagaggaattgaa
aagactgccaaggccttggtgtctgagctgaaatcaatgtcaaaagaggtggaagatagc
gagcttgcagacgttgctgctgtgagtgctggaaataactatgaagtagggaatatgata
gctgaagcattgagcaaagttggtaggaaaggtgttgtgactcttgaagagggaaaaagt
gcagaaaatagtctttatgttgtcgaaggaatgcagtttgatcgtggttacatatctcca
tattttgtcactgatagtgagaaaatggctgttgaatttgagaactgcaagttattactg
gttgacaagaaaataaccaatgcaagagatctcataaatgtcctggaagaagctatcaga
ggtggatatcctattctaatagttgctgaagatatagaacaagaagctctgggaactctc
gttgtgaacaaacttaggggagcgctgaaggttgctgctctcaaagctcctggttttggt
gaaagaaagagtcagtatctcgatgacattgcaattttgacgggagcaactgtgatcagg
gacgaggttgggctaactttagaccaggcagacaaggatgttttgggccatgctgccaag
gtggtattgacgaaggattatacaacaataattggtgatggaagcactcaggaagctgtc
aataaacgtgtggctcagattaaaaatcttattgaggtggcagagcaagattacgaaaag
gaaaagctgaatgaaagaattgcaaagctttcaggaggtgttgctgtgatccaggttgga
gcacagactgaaactgaactgaaggagaagaagctcagagtagaagatgctctcaatgca
acaaaggcagctgttgaggaaggaattgttgttggaggtggatgcacattgctgaggctt
gcatccaaggttgatgcttttaaggaaactcttgaaaatgacgaggagaaggttggagca
gacattgtcaaaagagctttgagttacccattgaaattgatagcaaaaaatgctggtgtt
aatggaagtgttgttagtgagaaggtgctatctagtgacaatcctaaatatgggtacaac
gctgctactggacaatacgaagatctaatggctgctgggataatagatccaactaaggtg
gtcagatgttgcttagaacatgcatcatctgtggcgaagacgtttttgatgtccgattgt
gtagttgtcgagatcaaggagcctgagccagttgctgcagggagcccaatggacaattca
ggatacggttactaa
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