KEGG   Primulina tabacum: 142553436
Entry
142553436         CDS       T11246                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB7
  KO
K03015  DNA-directed RNA polymerase II subunit RPB7
Organism
ptab  Primulina tabacum
Pathway
ptab03020  RNA polymerase
ptab03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ptab00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    142553436
  09124 Replication and repair
   03420 Nucleotide excision repair
    142553436
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ptab03021]
    142553436
   03019 Messenger RNA biogenesis [BR:ptab03019]
    142553436
   03400 DNA repair and recombination proteins [BR:ptab03400]
    142553436
Transcription machinery [BR:ptab03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     142553436
Messenger RNA biogenesis [BR:ptab03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     142553436
DNA repair and recombination proteins [BR:ptab03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      142553436
SSDB
Motif
Pfam: S1 SHS2_Rpb7-N Vg_Tdu
Other DBs
NCBI-GeneID: 142553436
NCBI-ProteinID: XP_075519796
LinkDB
Position
8:6698832..6701209
AA seq 177 aa
MFFHIVLERNMQLHPRHFGRDLRDKLVAKLMKDVEGTCSGRHGFIVAITGIESVGKGLIR
DGTGFVTFPVKYQCVVFRPFKGEIVEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ
SGDMPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVISDPGATS
NT seq 534 nt   +upstreamnt  +downstreamnt
atgttttttcacatagtattggagcggaacatgcagctgcatcctcgccacttcggccgt
gacctacgggataagctcgtggccaagctcatgaaggacgtcgaagggacttgcagcggt
cgccatgggttcattgtggcgattactggcattgaaagtgtaggaaagggattaattcgt
gatggaacgggatttgtcacgtttcctgttaagtatcagtgtgttgtttttcgacccttt
aaaggagagatcgtggaagccgttgttacaatggttaataagatgggtttttttgctgaa
gcaggtcccgtccaaattttcgtgtccaatcacttgataccagatgatatggagtttcaa
tctggggacatgcctaattacacaacttcagatggttctgtcaaaattcagaaagacagc
gaagttaggctgaagataattggaacccgggttgatgccacagaaattttttgtattggc
accataaaagatgactttttgggtgtgattagcgatccaggcgcgacctcataa

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