Primulina tabacum: 142553440
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Entry
142553440 CDS
T11246
Name
(RefSeq) E3 ubiquitin-protein ligase RDUF2-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
ptab Primulina tabacum
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ptab04131
]
142553440
04121 Ubiquitin system [BR:
ptab04121
]
142553440
Enzymes [BR:
ptab01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
142553440
Membrane trafficking [BR:
ptab04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
142553440
Ubiquitin system [BR:
ptab04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
142553440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1117
zf-RING_2
Zn_ribbon_19
zf-C3HC4_2
zf-RING_11
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-RING_5
zf-ANAPC11
HypA
zf-C3HC4_3
Desulfoferrod_N
zf-HC5HC2H
zf_RING_Vps8
Motif
Other DBs
NCBI-GeneID:
142553440
NCBI-ProteinID:
XP_075519806
LinkDB
All DBs
Position
8:6730421..6731770
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AA seq
345 aa
AA seq
DB search
MASATTPTAAAAAAAAATAAYWCYTCTRTVSVIPGGGNDVVCPHCDGGFVQAVDPTDFSL
DPLRRIDSPRAGPGRRRRNGLSFNPLIVLRSPTELEPPPDEGGGMRSYELYYNDGVGSGL
RPLPWTMSESLLGSGFELMLDHLSQIGFSLWNRPENPPASKKAVESLPVLEILSTHVSSD
LHCAVCVESFSIGSEAREMPCKHIYHSECILPWLSLRNSCPVCRYQLPTDGHDAIPGRGV
GLTIWRLPGGGFAVGRFAGGREVDMPAVYSEMDGNLSFNGVARWENELGPWIRRRTVGGR
IRRFFDNFGSFFRRTMSDSSTGSGHSFLTRYSLRRRRRRGLVSLE
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atggcttcagctactactcccacggcggcagcggcagcggcagcggcagcgacggcagcg
tattggtgttacacctgcacaagaacagttagcgtgatacctggaggtgggaacgatgtc
gtttgtccacactgcgacggtgggttcgtacaggcagtggatccgacggatttctcgctg
gaccctttgaggaggatcgattctccccgggctggtcccggccgccgtcgccgtaacggg
ttgtcgtttaacccactgattgtactccgtagcccgacggagttggaacccccaccagat
gaagggggcggcatgcggagttacgagctctactacaacgatggcgttggttcgggtctg
cggccgttgccgtggacgatgtcggagtctttgcttggatctggattcgaattgatgctc
gaccacctctcgcagatcggattcagcctctggaaccgacccgaaaatccgccggcaagc
aaaaaggcggttgaatcgctgccggtgttggaaattctctcgacccacgtcagttccgat
ttacactgcgccgtctgcgttgaatctttctcgatcggatccgaagcccgcgaaatgcct
tgcaaacatatttatcattcagagtgcattctcccgtggctgagtctccgcaattcctgc
ccagtatgccggtaccagttacctaccgatggccatgatgcgattccgggtcgcggggtg
gggctgactatatggaggcttcccggtggtggttttgcggtggggaggtttgctggggga
agagaggtcgatatgccggcggtttattcggaaatggacggtaatttgagtttcaacggg
gttgcacgttgggagaatgagctggggccgtggataaggcggcgaacagtgggaggtaga
attcggaggttcttcgataatttcggatccttttttaggaggacaatgtccgattcttca
acgggttcgggtcattcgtttttgacaaggtactctttgaggaggcggagaaggagaggc
ttggtttccttggagtag
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