Primulina tabacum: 142553459
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Entry
142553459 CDS
T11246
Name
(RefSeq) U-box domain-containing protein 13-like
KO
K27628
U-box domain-containing protein 12/13/14 [EC:
2.3.2.27
]
Organism
ptab Primulina tabacum
Pathway
ptab04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
142553459
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ptab04121
]
142553459
Enzymes [BR:
ptab01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
142553459
Ubiquitin system [BR:
ptab04121
]
Ubiquitin ligases (E3)
U-box type E3
142553459
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
U-box
ARM_ARMC5
HEAT_2
Neurochondrin
MLKL_N
KAP
zf-Nse
Arm_2
HEAT_EZ
zf-RING_UBOX
HEAT_EF3_GNC1
zf-NOSIP
Motif
Other DBs
NCBI-GeneID:
142553459
NCBI-ProteinID:
XP_075519842
LinkDB
All DBs
Position
8:complement(6901362..6905441)
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AA seq
673 aa
AA seq
DB search
MDEDKAALSRKLIEIVNEISAISEYRSAVRKQYMNLARRLKLLTPMFEEIRDSKESIPEE
SIIALASLVKALESAKELLLFGSEGSKIYLVLEREQIITKFQEVTAQLEQALSGISFEKL
DISDEVKEQVELVLAQFRRAKGRVDAPDVELHHDLLCLYNQSNDAAEDPDVLRRLVEKLQ
LDGISDLTQESLALHELVADTGGHPEEIIEKMSMLLKKIKDFVLTVNPNIDSTTMEKSVP
ASSSGKKLTEGNQKNLVIPDDFRCPISLELMRDPVIVSTGQTYERTYIEQWLRSGHRTCP
KTQQTLTSNSLTPNYVLRSLIAQWCEANGIELPKQPSCYGATKTTSACSSAELNRIEALL
CKLTSASLEDQRSAAGEIRLLAKRNADNRVAIAEAGAIPLLIQLLSTPDSRTQEHSVTAL
LNLSICDTNKGSIISSGAVPGIVHVLKKGSTEARENAAATLFSLSVVDENKVTIGSSGAI
PPLVTLLSEGTQRGKKDAATALFNLCIYQGNKGKAVRAGVIPTLMRLLTEPQGSMVDEAL
AILAILSSHPDGKAAIGASEAVPVLVDVIGNGSPRNKENAAAVLVHLCSGDQQHLADAQE
LGVMGPLLDLAHNGTERGKRKAALLLERMNRFVETKKQAETQTHPESAITTAETRAQNSN
PESAIATTATAIG
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atggacgaagataaagccgcgttatcgcggaaactgattgaaatagtcaatgaaatctcg
gcgatttcggagtaccgatctgccgtgaggaagcagtacatgaatctagctcggcggctg
aagctgttgactccaatgtttgaagagattcgcgatagcaaagagtcgatccccgaggag
tccattatagcattagcttctctggtgaaagctcttgaatcggctaaggaattgctcctg
tttggcagcgaagggagcaagatttatctggtcttggagagagagcaaatcattactaaa
tttcaagaagtcacggctcagttggagcaagctctgagtggcatttcattcgaaaaactc
gatatatcagatgaagtaaaggaacaggttgagctcgttcttgctcaattcagaagagcg
aagggaagggtggatgcaccagatgttgagctgcaccatgatcttttgtgcctttataat
cagagtaatgatgctgcagaagatccagatgtattgaggagattggttgaaaaattacag
cttgatggcatatctgacttaactcaagaatcactagctttgcatgaattagttgctgac
actggtgggcatccagaggaaatcatagagaagatgtcgatgctattgaagaagattaag
gattttgtgctgacagtaaatcctaacattgactccactacaatggaaaagtctgttcct
gcaagtagcagtgggaaaaaattgaccgagggaaatcagaagaaccttgtcataccagat
gactttcgttgtcctatctcattagagctaatgagggatcctgtcatagtatctacagga
cagacatatgaaaggacgtacatcgaacaatggttgcgatcggggcatcgtacttgtccc
aagacacaacaaactctgactagcaattctctgacgccaaactatgttcttcgaagtctt
attgcacagtggtgtgaagcaaatgggattgaactcccaaagcaaccaagctgctatgga
gccactaagactacatctgcatgctcctctgctgagcttaacagaatagaggctcttcta
tgtaagctaacatctgccagcctcgaagaccaacggtctgcagcaggtgaaatccgcctt
cttgccaaacgaaatgcggataatcgggtggcaatagcagaagctggtgcaatccccctg
cttatccagcttttatcaactcctgattctcgaactcaggagcactccgttactgcactt
cttaacctctcgatatgtgacaccaacaaggggagcataatatcctctggggctgttcct
ggtatagttcacgtgctaaagaaaggaagcacggaagcgcgggaaaatgcagctgccacc
ttgtttagcctgtcagtagttgatgaaaataaggtgacaattggctcttcaggagcaatt
ccaccactggtaacacttctaagtgaaggtactcaaagagggaagaaagatgctgctacg
gcactcttcaacttatgcatatatcaaggtaataaaggcaaggctgtgagggcaggagtt
attcccacattaatgcggctgcttaccgaaccccaaggcagcatggtggatgaggccttg
gcaatattggcaatattgtctagccatcctgatggaaaggcggccattggagcttcagag
gccgtaccggttttagttgatgttattggtaatggctccccaagaaacaaagaaaatgca
gcagcagtattggtacatctctgctctggagaccaacagcaccttgctgacgcacaggaa
ctaggtgttatgggaccgcttcttgatttggcgcataatgggacagaaaggggaaagaga
aaagctgccctactgcttgaacggatgaatagatttgtagaaacaaaaaagcaggctgag
actcagactcatccagaatcagctatcacaaccgctgagactcgggctcaaaactcaaac
ccagaatcagctatcgcaaccaccgcgactgccattggttaa
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