KEGG   Primulina tabacum: 142553461
Entry
142553461         CDS       T11246                                 
Name
(RefSeq) THO complex subunit 4A-like
  KO
K12881  THO complex subunit 4
Organism
ptab  Primulina tabacum
Pathway
ptab03013  Nucleocytoplasmic transport
ptab03015  mRNA surveillance pathway
ptab03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ptab00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    142553461
  09122 Translation
   03013 Nucleocytoplasmic transport
    142553461
   03015 mRNA surveillance pathway
    142553461
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ptab03019]
    142553461
   03041 Spliceosome [BR:ptab03041]
    142553461
Messenger RNA biogenesis [BR:ptab03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     142553461
    TREX complex
     142553461
Spliceosome [BR:ptab03041]
 Complex C
  Other components
   EJC/TREX
    142553461
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    142553461
SSDB
Motif
Pfam: RRM_1 FoP_duplication RRM_3 Kdo_hydroxy Btz
Other DBs
NCBI-GeneID: 142553461
NCBI-ProteinID: XP_075519845
LinkDB
Position
8:6928305..6930914
AA seq 234 aa
MSGGALDMTLDDLIKSNKKSSVRGRGRAAGPGPTRRLPNRSANRAGPYATPKAPESAWGH
DMFAGGGVGGRVASIETGTKLYVSNLDYGVSNDDIKELFAEVGDLKRFNIHYDKSGRSKG
TAELVFSRRQDALNAIKKYNNVQLDGKPMKIELVGTNISTPAAGLPTVGGFGDSNVAPRS
GQVRGGFGRSGGGRRGRGFGRGRGQGRGGRGEKVSADDLDADLEKYHADAMQTN
NT seq 705 nt   +upstreamnt  +downstreamnt
atgtcgggtggtgccctggacatgaccctcgacgatctgatcaagagtaacaaaaaatct
tccgtccggggtagaggacgcgccgctggtcctggacccacccgccgcttaccgaatcgc
tccgcgaatcgtgctggtccatacgctactccgaaggcaccagaatcagcttggggtcat
gacatgttcgccggtggcggcgttggtggtcgagtggctagtattgaaacaggaaccaag
ttatacgtatctaatcttgattatggcgtatctaacgacgatattaaggaactctttgct
gaagttggcgaccttaaacgttttaatatacactatgataagagcgggcgatcaaagggt
actgctgaattagttttctctcgacgtcaagatgcattgaatgccatcaagaaatacaat
aatgttcagctggatgggaaaccaatgaaaatagaactcgttggtactaacatctctact
cctgctgctggtcttcccactgttggtggttttggtgattcaaatgttgctcctcgaagt
ggacaagtgaggggtggttttggaaggtcaggcggtggtagacgaggtcgtggatttgga
aggggacgtggacagggaagggggggacgtggtgagaaggtatccgctgatgatctagat
gctgatttggagaagtatcatgcagatgcaatgcagacaaattga

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