Primulina tabacum: 142553461
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Entry
142553461 CDS
T11246
Name
(RefSeq) THO complex subunit 4A-like
KO
K12881
THO complex subunit 4
Organism
ptab Primulina tabacum
Pathway
ptab03013
Nucleocytoplasmic transport
ptab03015
mRNA surveillance pathway
ptab03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
142553461
09122 Translation
03013 Nucleocytoplasmic transport
142553461
03015 mRNA surveillance pathway
142553461
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptab03019
]
142553461
03041 Spliceosome [BR:
ptab03041
]
142553461
Messenger RNA biogenesis [BR:
ptab03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
142553461
TREX complex
142553461
Spliceosome [BR:
ptab03041
]
Complex C
Other components
EJC/TREX
142553461
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
142553461
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
RRM_3
Kdo_hydroxy
Btz
Motif
Other DBs
NCBI-GeneID:
142553461
NCBI-ProteinID:
XP_075519845
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All DBs
Position
8:6928305..6930914
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AA seq
234 aa
AA seq
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MSGGALDMTLDDLIKSNKKSSVRGRGRAAGPGPTRRLPNRSANRAGPYATPKAPESAWGH
DMFAGGGVGGRVASIETGTKLYVSNLDYGVSNDDIKELFAEVGDLKRFNIHYDKSGRSKG
TAELVFSRRQDALNAIKKYNNVQLDGKPMKIELVGTNISTPAAGLPTVGGFGDSNVAPRS
GQVRGGFGRSGGGRRGRGFGRGRGQGRGGRGEKVSADDLDADLEKYHADAMQTN
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggtggtgccctggacatgaccctcgacgatctgatcaagagtaacaaaaaatct
tccgtccggggtagaggacgcgccgctggtcctggacccacccgccgcttaccgaatcgc
tccgcgaatcgtgctggtccatacgctactccgaaggcaccagaatcagcttggggtcat
gacatgttcgccggtggcggcgttggtggtcgagtggctagtattgaaacaggaaccaag
ttatacgtatctaatcttgattatggcgtatctaacgacgatattaaggaactctttgct
gaagttggcgaccttaaacgttttaatatacactatgataagagcgggcgatcaaagggt
actgctgaattagttttctctcgacgtcaagatgcattgaatgccatcaagaaatacaat
aatgttcagctggatgggaaaccaatgaaaatagaactcgttggtactaacatctctact
cctgctgctggtcttcccactgttggtggttttggtgattcaaatgttgctcctcgaagt
ggacaagtgaggggtggttttggaaggtcaggcggtggtagacgaggtcgtggatttgga
aggggacgtggacagggaagggggggacgtggtgagaaggtatccgctgatgatctagat
gctgatttggagaagtatcatgcagatgcaatgcagacaaattga
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integrated database retrieval system