Primulina tabacum: 142553509
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Entry
142553509 CDS
T11246
Name
(RefSeq) ruBisCO large subunit-binding protein subunit alpha-like
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
ptab Primulina tabacum
Pathway
ptab03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
142553509
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptab03019
]
142553509
03110 Chaperones and folding catalysts [BR:
ptab03110
]
142553509
03029 Mitochondrial biogenesis [BR:
ptab03029
]
142553509
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ptab04147
]
142553509
Enzymes [BR:
ptab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
142553509
Messenger RNA biogenesis [BR:
ptab03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
142553509
Chaperones and folding catalysts [BR:
ptab03110
]
Heat shock proteins
HSP60 / Chaperonin
142553509
Mitochondrial biogenesis [BR:
ptab03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
142553509
Exosome [BR:
ptab04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
142553509
Exosomal proteins of other body fluids (saliva and urine)
142553509
Exosomal proteins of breast cancer cells
142553509
Exosomal proteins of colorectal cancer cells
142553509
Exosomal proteins of bladder cancer cells
142553509
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Phage_DEC_PhiTE
Motif
Other DBs
NCBI-GeneID:
142553509
NCBI-ProteinID:
XP_075519939
LinkDB
All DBs
Position
8:7481490..7485294
Genome browser
AA seq
595 aa
AA seq
DB search
MASANAISTAALLPYPSKRGGLKSRKVSQLQQGQKFENKQVKNRFVVRASAKEIAFDQKS
RAAMQSGIDKLADAVGLTLGPRGRNVVLDEYGAPKVVNDGVTIARAIELPDAMENAGAAL
IREVASKTNDSAGDGTTTASILAREIIKLGLLSVTSGANPVSLKKGIDKTVQGLVDELEK
KSRPIKGRDDIKAIATISAGNDDTIGIMIADAVDKVGPDGVLSIESSSSFETTVDVEEGM
EIDRGYISPQFVTNQEKLLVEFENARILVTDQKISAIKDIIPLLEKTTQLRAPLLIIAED
VTGEALATLVVNKLRGVLNVAAIKAPGFGERRKALLQDIAILTGAEYQATDLALRVENTD
VDQLGIARKITISKDSTTIIADAASKDELQARIAQLKKELSETESVYDSEKLAERIAKLS
GGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSTVVPTIKEKI
EDADERLGADIIQKALVAPALLIAQNAGVEGEVVVEKLKSSDWEFGYNAMTDTYENLVEA
GVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPKPKMPLAAAAGGPSGMGSYSV
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atggcttcagctaatgccatatctaccgccgcgctcctcccttatccgtctaaacggggt
ggattgaagagccggaaagtgagccaattacagcaggggcagaagtttgagaacaagcag
gtcaagaatcggtttgttgtcagggccagtgctaaggaaattgcgttcgatcagaagtca
agggctgctatgcaatctggtattgataagcttgctgatgcggttggccttactcttgga
cccaggggaagaaatgttgtacttgatgaatacggggcaccaaaggtggtcaatgatggt
gtcacaattgctcgagccatagaattgcctgatgctatggaaaatgctggtgctgctttg
attagggaggttgctagcaagactaatgattctgctggtgatgggacaactacagcatcc
atccttgctcgtgaaattatcaaactcggccttctaagtgttacctccggggcaaatccg
gtttcattgaagaaaggtatcgataaaactgtgcagggtttggttgatgagcttgagaaa
aaatccaggcccattaaaggtcgtgatgatatcaaagccattgccactatctctgccgga
aatgatgataccattgggataatgattgccgatgctgtggacaaggttggaccagatggt
gtcttatccattgaatcatcatcttcctttgagaccacagttgacgtagaagaaggaatg
gagattgatcgaggatacatctccccgcaatttgtcaccaaccaagagaagctgcttgtt
gaatttgagaatgcgagaatattagtcacggaccagaagatttctgccatcaaggatatt
attcccttgcttgagaagactactcagttacgagctcctttgctcatcattgctgaagat
gtcaccggagaagctttggcaactcttgttgtaaacaagcttaggggtgttctgaatgtt
gctgccatcaaagctccgggttttggagaaagaagaaaagcacttcttcaagacattgcc
atcttgacgggggctgaatatcaagctactgatttggccttgcgtgtggaaaacactgat
gtggatcagttgggtatagcaagaaagataaccattagcaaagactcaaccaccatcatt
gctgatgctgcatctaaagatgagctccaggctaggattgctcagcttaaaaaggaactc
tctgagacagagtcagtttatgattctgagaaacttgctgaaagaattgcaaaattatct
ggtggggttgctgtgatcaaggttggtgcagcaacagagaccgagctcgaggaccgcaag
cttcgtattgaggatgccaaaaatgcaacatttgctgctatcgaggaaggcattgtgccg
ggtggcggtgctgcattagtgcacctatcaactgttgttccaaccatcaaggagaagatt
gaagatgccgatgaaagattaggcgccgatataattcaaaaggccctagttgcaccagca
ttgttgattgcgcaaaatgctggggtcgaaggtgaggtggtcgtggagaaattgaagtct
agcgattgggagtttggttacaatgcaatgaccgacacgtacgagaacttggtagaagct
ggagttattgaccctgctaaggtaacaagatgtgcactgcaaaatgctgcttcggttgct
ggaatggtgcttaccacgcaagccatagttgtggagaaacctaagccaaagatgccacta
gcagctgctgctggtggcccgtcaggtatgggcagctactcagtgtga
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