Primulina tabacum: 142553628
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Entry
142553628 CDS
T11246
Name
(RefSeq) protein CHROMATIN REMODELING 5-like
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
ptab Primulina tabacum
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ptab03021
]
142553628
03036 Chromosome and associated proteins [BR:
ptab03036
]
142553628
Transcription machinery [BR:
ptab03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
142553628
Chromosome and associated proteins [BR:
ptab03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
142553628
SLIK complex
142553628
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HTH_CHD1_Hrp3
Chromo
CHD1-like_C
HDA2-3
ResIII
Chromo_MIT1
DEAD
Motif
Other DBs
NCBI-GeneID:
142553628
NCBI-ProteinID:
XP_075520131
LinkDB
All DBs
Position
8:complement(9019046..9052651)
Genome browser
AA seq
1659 aa
AA seq
DB search
MAFYRDFPGGMIEQIELNDKNHSQQLTVNSNRIHDNVATNIEELAKSTPSHDNGEDDDKN
LRVGNTQSPMRRMAVGGKWGSSFWKDFQPTVSQSWEESKSVSEYEGSDLEESSDGAEDRM
ESKSYDMRHKKVSAKGHQIVPADEMLSDEYYEQDGDDHSDMPNHRRTMNQSSGFGLRMPP
RPVALSGIIGKSKLLKANRYGHEDADFEDAGDDDDKDGDDPDDADFDPDFGAADEHWGTK
DRDKDWDAEESDEEDNVTDDDLDISDEDDIYIKKSRAKHSAKSGQTSKSTRDRSLAPSAR
RKIGRTSIEEDERESSAENSEYYSDGGFRNARRDPTARRKNGGRSESIKASVRSNELRTS
SRSVRKVSYVECDESEDVDEGKKMRTHKDEIEEDDGDAIEKVLWHQPKGMAEEALRSNNS
TEPVVLSYFFDSEPDWNEIEFLIKWKGQSHLHCQWKPLSELQNLSGFKKVLNYTKKMTEE
FKYRKMLSREEIEVNDVSKEMDLDIIKLNSQVERVIAARVTNDGLGNVVPEYLVKWRGLS
YAEATWEKDVDISFGQDAIDEYKAREVVIMVQGKTVDFQRKKSKGSLRKLDEQPEWLKGG
TLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQVCQQYEFYNDKKTGR
VTRFDTLLTTYEVLLKDKAVLSKIKWNYLMVDEAHRLKNSEALLYTTLSEFSTKNKLLIT
GTPLQNSVEELWALLHFLDPDKFKVKDDFVQNYKNLSSFNEMELTNLHMELRPHILRRVI
KDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFHDLNKGVRGNQVSLLNIVGELKKCC
NHPFLFESADIGYGGDANFLGSSKLERIILSSGKRVLLDKLLSRLHETGHRVLIFSQMVR
MLDLLAEYLSIKGFKFQRLDGSTKAELRQQAMDHFNAPGSEDFCFLLSTRAGGLGINLAT
ADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDILERTKKKMVLDHL
VIQKLNAEGRLEKKESKKGSSFDKSELSAILRFGAEELFREDKNDEESKKKLLSMDINEI
LERAEKVEDKATEEEGEGHELLSAFKVANFSSAEDDGTFWSRMIKPEAVSQAEDALAPRA
ARNIKSYAEAIPPERINKRNKGVEPQDRLSKRRRADSGYSLPVLEGATAQVRGWSHGNLP
KRDATRFFRAVKKFGDDSQIGLIASEVGGVVESAPMEAQIELYDALIDGCREAVKGETLD
PKGPLLDFFGVPVKADEVLCRVKELQLLTKRISRYEDPISQFRALAYLKPATWSKGCGWN
QKDDARLLLGIHYHGFGNWEKVRLDETLGLTKKIAPVELQHHETFLPRAPQLKERAAQLL
EMEVAAVGGKNSNAKVGRKNAKKQKETHPLSCGKGRLGKSDSPGKVRTNKSRALKSEKIE
PLVKEEGEMSDNEEVYEQFKEVKWMEWCADVLIYEEKTLRSLQKLQSVSATLPKEKVLSK
IRNYLQLLGRRIDQIVLDYEQGPYKQERMTTRLWNYVSTFSNMSGEKLQQIYSKLKQEHV
TGGGGLYHINGQAAAFMQRDLDVGKFEAWKRRKRAKTDVSHVQHPYQRSTGNGTRLPDPN
SSGILGPPPSDGRQFSNGKPYRTQRGSFPSRQGFSSGTK
NT seq
4980 nt
NT seq
+upstream
nt +downstream
nt
atggcattttatagggattttccaggtggaatgatagaacagattgaattgaacgataaa
aaccattcacagcagctgactgttaatagcaatagaatacacgataatgtagccacaaac
attgaggaactagcaaaatctacaccaagtcatgataatggagaagatgatgacaaaaat
ttaagagtaggaaatacacagtcacctatgaggagaatggctgtgggtgggaagtggggt
tcaagtttttggaaggatttccagcccactgtgtcacagtcttgggaggagtctaaaagt
gtgtcagaatatgaagggtctgatttggaggaatcatctgatggcgcagaagataggatg
gaatctaaaagttatgatatgagacacaaaaaagtgtctgctaaaggacatcaaattgtt
cctgcagatgagatgttgtctgatgaatactatgagcaggatggagatgatcacagtgat
atgccaaatcatcgcagaactatgaaccaatcaagtgggtttggtttgagaatgccacct
cgtcctgttgctttgagtggtatcattgggaaatcaaaattgttgaaggctaacaggtac
ggtcatgaagatgccgacttcgaagatgccggcgacgatgatgacaaagatggggatgat
cctgatgatgctgactttgatcctgattttggggctgctgacgagcactggggaaccaag
gatagagataaagattgggatgctgaagaatctgatgaagaagataatgtcacggatgat
gatttggatatctctgatgaagatgacatctacataaagaaaagtagggccaagcattca
gcaaagagcggccaaacttcgaagtccaccagggatagatcacttgcaccatccgctcgg
cgaaagataggcagaacttctattgaggaagatgaaagggaatcttctgctgagaactca
gaatattatagtgatggtggttttagaaatgcaaggagagatcctactgctcgcaggaag
aatggaggtcggtctgagtcgattaaagcttctgtccgtagcaatgaactacgaacttca
agtcgttcagtgcggaaagtatcatatgttgagtgtgatgaaagtgaagatgttgatgaa
gggaaaaaaatgaggacacataaggacgagattgaagaagatgacggtgatgcaatcgag
aaggtattgtggcatcaaccaaagggtatggctgaagaagctttgagaagtaataactcc
accgagcctgtggttttgagctatttttttgactcagaaccagattggaatgagattgag
tttttaataaaatggaaaggccagtctcatttacattgtcaatggaaaccactctctgaa
ctgcagaatctcagtggttttaagaaggttttgaattacaccaaaaaaatgacggaggaa
ttcaagtatcggaagatgttatcccgtgaggagatcgaggtaaatgacgtgagcaaggaa
atggacctggacattatcaaactaaacagtcaggtggagagagtaattgctgccagggtc
accaatgatggtttgggtaatgtagtaccagaatatttggtcaagtggcgtggactctca
tatgctgaagctacttgggagaaagatgttgatatttcatttggccaggatgctattgat
gagtacaaggctcgcgaggttgtcattatggtgcaagggaagactgttgatttccagcgg
aaaaaaagcaaaggaagtcttaggaagcttgatgagcagcctgagtggttgaaaggggga
actcttcgagattatcagcttgagggtttgaactttttagttaacagctggagaaatgat
acaaatgtaatattggctgatgaaatgggacttgggaaaactgtccagtcagtttcaatg
cttggatttttgcaggtgtgtcagcaatatgaattttacaatgataaaaaaacaggtaga
gtcacgcggttcgataccttattaactacatatgaggttttattgaaagataaagctgtc
ctctcaaaaatcaagtggaactatcttatggttgatgaagcccataggctaaagaacagc
gaagctttgttgtacacaacattatcagaattcagcacgaagaataagttgctaatcact
ggcaccccattgcaaaacagtgttgaagagctgtgggctttgcttcactttcttgatcca
gacaagttcaaggtgaaggatgactttgtgcagaattacaagaatcttagttcttttaac
gagatggagcttactaatcttcacatggaattgagaccccacattcttagaagagttata
aaagatgtagagaaatctttgcctccaaagattgaacgcatacttagagttgagatgtcc
ccactgcagaaacagtactacaaatggattttggaacgcaacttccatgatttgaataaa
ggagtccgagggaatcaggtttcgcttttaaatattgtaggggagctgaagaaatgctgc
aatcatccatttttgtttgaaagtgcagacattggttatggtggggatgcaaattttctt
ggaagctctaaactggaacgaataattctaagcagcgggaaacgtgtccttctcgataag
ctgctcagcaggttgcatgaaacaggtcaccgtgttttgatattttctcagatggtaagg
atgttggatttactagctgaatatttatcaatcaagggattcaaatttcaaagacttgat
ggtagtacaaaggctgagttgcgtcagcaggctatggatcattttaatgctcctgggagc
gaggatttctgttttcttctttccactcgtgccggtggattgggtattaatcttgcgact
gcggacacagttattatttttgattctgattggaatccacaaaatgatttgcaggccatg
agccgagctcatagaattgggcaacaagaagtggtgaacatttaccgatttgttacaagc
aagagtgttgaggaagatatcttggagaggacgaagaaaaagatggttctggaccaccta
gttattcaaaaactgaatgctgaaggtaggctggagaaaaaggagtcgaagaaaggaagt
tcatttgataaaagtgagctttctgcaattctgaggtttggggccgaggaactttttagg
gaggacaaaaatgacgaagaaagcaagaaaaaacttttgagtatggatattaatgagatt
cttgaaagagcggagaaggttgaagacaaagcaactgaagaagaaggagaagggcacgag
ttgttgagtgcttttaaggtagccaatttcagtagtgctgaagatgatggcactttttgg
agccgcatgataaaacctgaagctgtctcgcaagccgaagatgctttagctccacgagca
gctcgaaatattaaaagctatgcagaggctataccacctgaaaggattaataaacggaac
aagggtgtggagccccaggatagactttcaaaacgtcggagagctgattctggttattct
cttcctgtgcttgagggtgccactgctcaagtaaggggatggtctcatggaaacttgccc
aagagagatgcaacccggttttttcgagcggttaagaagtttggagatgatagccaaatt
ggcttaatcgcctcagaagttggtggtgtagttgaatctgctccaatggaggcacaaatt
gagctttatgatgctttgattgatggatgtagagaagcagttaaaggagagacacttgat
ccaaaggggcctctattggatttttttggtgtgcctgtaaaagctgatgaagttttatgc
cgtgttaaagaacttcagcttcttaccaagaggattagccgctatgaagatcctatttct
caattcagagcacttgcatatctcaaacctgccacatggtctaagggctgtggctggaat
cagaaggacgatgcaaggctgctgcttggtattcactatcatggatttggcaattgggaa
aaggtaagattagatgaaacgcttggccttacaaaaaaaattgctcctgttgaacttcaa
catcatgagactttcttacctcgagctccccaactgaaagaacgagcagcacaacttctg
gaaatggaagtggcagctgttggggggaagaattctaacgcaaaagtgggccgtaagaat
gcaaaaaaacagaaagaaactcatccattgtcatgtgggaaaggcagactagggaagtct
gattctcccgggaaggttcgaaccaacaaaagtagagctctgaaatccgagaagattgaa
ccattagtgaaagaggaaggtgaaatgtctgataatgaagaagtttatgagcaattcaag
gaagttaagtggatggaatggtgtgcagatgtcctgatatacgaagaaaagactttgaga
agtctccaaaaacttcagtctgttagtgcaactctacccaaagagaaggtgctttccaaa
attaggaattacttgcagcttcttggtcggaggattgaccaaattgttttagactatgag
caggggccttataagcaagaaaggatgaccacacgattatggaattatgtatctacattt
tcaaatatgtctggtgagaaacttcaacaaatttattccaaacttaaacaggaacatgtt
actggaggcgggggactatatcacatcaatggtcaagctgcagcatttatgcagagggat
cttgacgtgggtaaatttgaagcttggaaacggagaaaaagagctaaaacagatgtttct
catgttcaacatccatatcaaagatccactggtaatgggacgcgattacctgatccgaac
tcttctgggattttgggacccccgccatctgatgggagacaatttagtaatggaaagcct
tacagaacacagcggggtagctttccttcaaggcaaggtttctcatctggtaccaagtaa
DBGET
integrated database retrieval system
