Primulina tabacum: 142553679
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Entry
142553679 CDS
T11246
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear pore complex protein NUP107
KO
K14301
nuclear pore complex protein Nup107
Organism
ptab Primulina tabacum
Pathway
ptab03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
142553679
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptab03019
]
142553679
03036 Chromosome and associated proteins [BR:
ptab03036
]
142553679
Messenger RNA biogenesis [BR:
ptab03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
142553679
Chromosome and associated proteins [BR:
ptab03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
142553679
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup84_Nup100
Motif
Other DBs
NCBI-GeneID:
142553679
NCBI-ProteinID:
XP_075520232
LinkDB
All DBs
Position
8:complement(9710687..9742254)
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AA seq
1071 aa
AA seq
DB search
MEVDMETSPSYFDPEDFSSRERFRRYGKRHPGSSLSSHYDNSASSFRNAALFLEDIKHEV
ESLDTDNDGVPFESASKRRSSVERQESSRVDVSGDATRRRESESLKICKQEVDVGIESGD
TMIQLFASLLDSAHQGLMPISKLILQFESSCRDVSETIRYGSNERYRIIEDKLMRQRARL
LLDEGATWSLLWYLYGKGNEELPEDLIMFPTTSHLEACQFVATDHTTQLCLRIVQWLEGL
ASKALDSENKVRGSHVGTYLPSSGVWHHTQWHLKQGAFNPKIVHHLDFDAPTREQAHLLP
DDKKQDESLLEDVWALLRAGRLEEACNLCRSAGQPWRAATLCPFGDFGLFPSPEALKKNG
KDRMLQAIELDSGIGHQWHLWKWASYCASEKIAEQDGGKYERAVYAVQCSNLKRILPVCT
DWESACWAMAKSWLDVQVDIEIARLRPGGIDQSKSFGDAMERSPVQGDVSHTIGGPDSWP
HQILNQQPRNLSSLLQKLHSSDTVHEVVAQACKEHQRQIEMNLMLGDIPHLLDLIWSWIS
PSEDDRNIFRPHGDPQMMRFGAHLVLVLRYLLADQMNDAFREKMMTFGDFIIHIYAMFLF
TTQHEELVGIYASQLAQHRCVDLFVHMMELRLNSSVHVRYKIFISAIEYLPFSSEDDSRG
NFKQILDRVLSRSRESSIGKYSKSSDVAEQHRLQSQQKAMVIQWLCFTPPSTINDAKFVA
ERLVLLALMHSNLLLREFALMSMWRVPAPPVGAHTVLSLLAEPLKQQTEILLSAEDLDVS
ENLREFQDWSEYYSCDAKYRSWLKIELANEEVLPSELSNEEKQRTMAVARETLISSLKLL
SRIDNPWLVSTRGHLLESMEPVFLELHATAVLCLPSGECILPDATLCATLTSDFYSSISE
EDILHRELMVNVSISTSDNYFIKVVLRCLAVEGDGLGPHDLNDGGILAAVLAAGFKGELS
RFQAGVTMDISRLDAWYSNNDGSLDGPATYIVHGLCRKCCIPEIFLRCMQVSVSLIKSGY
PPEGHRELIELVASPKTDFLHLFSQHQLQELLLFEREYTIYEMDLEEESDS
NT seq
3216 nt
NT seq
+upstream
nt +downstream
nt
atggaagttgatatggagacttctcccagctattttgatcctgaagatttcagcagcaga
gaacggtttcgtcgatacgggaaaagacatccaggttcaagcctgtcatcacactatgat
aattcagcttcaagttttcgtaatgctgcactttttcttgaagacataaaacatgaggtt
gagagccttgacacagataatgatggagtgccttttgaatctgcttctaagagaagatca
tctgttgagaggcaggaatcatccagggtggatgtgagtggtgatgcaacacgccgacgg
gaaagtgaatccctgaagatttgcaaacaggaagttgatgtgggaattgaaagtggtgac
actatgatccaattgtttgcttcgcttttggatagtgcccatcaagggttgatgcctatt
tctaagctgattttgcaatttgagagttcttgccgcgatgtttctgagacgattagatat
ggttccaatgagaggtatagaattattgaggataaactgatgagacagagggctcgactt
ttgcttgatgaaggcgctacctggtctcttctgtggtacctgtatgggaaaggcaatgag
gaacttcctgaagatttaatcatgttccctacaacttcacatttggaggcatgccaattt
gttgcaactgatcatacaacgcagttatgtcttaggattgttcaatggcttgagggattg
gcatccaaagctcttgattcggaaaataaggttcgaggatctcatgtgggcacttatctc
cctagctcaggtgtgtggcatcatactcaatggcatctaaaacaaggtgccttcaatcca
aaaattgttcaccacttggattttgatgctccaacccgcgaacaagctcatctgctgcct
gatgacaagaagcaagatgaatctctcttggaagatgtctgggctttgctgagagctgga
agactagaagaggcttgtaatctttgccgatctgctggacagccatggagggctgcaact
ctgtgcccctttggagatttcggtttatttccatctcctgaagccctaaagaaaaatggc
aaggacaggatgctacaggccatagaattggatagtggaattggtcaccaatggcatctt
tggaagtgggcctcttattgtgcatccgaaaaaattgctgaacaagatggtggcaaatat
gaaagagcagtgtatgcagtccaatgcagcaatttgaagcgcattcttccggtctgtaca
gattgggagtctgcttgctgggcaatggccaaatcatggcttgatgtccaggttgatatc
gaaatagctcgtctgcgaccaggtggaattgaccagtctaagagttttggtgatgcgatg
gagaggagtcctgtgcaaggagatgtctctcatacaattggtgggcccgatagttggcct
catcaaatcctgaatcaacagcccaggaacctttcgtctctcctccagaaacttcattca
agtgacactgtgcacgaggtggttgctcaggcatgcaaggagcaccagaggcaaattgag
atgaatcttatgctaggagacatccctcatttgctggacctcatatggtcttggatatca
ccttccgaagatgatcgaaatattttcaggcctcacggagacccacaaatgatgcgtttt
ggtgctcatttagtgctggtgcttagatacttactagcagatcaaatgaatgatgctttc
agagagaagatgatgacatttggagacttcattatacacatctatgccatgttcctgttc
actacgcagcatgaagagctggtagggatctatgcttctcagcttgctcagcatcgttgc
gttgatctctttgtccatatgatggaattgaggctgaatagcagtgttcatgtcagatac
aagatctttatatctgctatcgagtacttaccgttttcttctgaagatgattcaagagga
aattttaaacaaatacttgaccgagttctttcgagatctcgagaaagcagtattggaaaa
tattccaagtcatcagatgttgcagagcagcatcggttgcagagtcaacaaaaagctatg
gttattcaatggctgtgctttacgcctccctcaacgattaatgatgccaagtttgttgct
gaaaggcttgttctccttgcactgatgcacagcaatttattgttgagggagtttgctctt
atgtcaatgtggagagtgccagcaccaccggttggggctcacacagtgcttagtctactt
gctgagcctttgaaacaacaaacagagatccttctttccgctgaggatcttgatgtttcc
gagaatctgagagagttccaggactggagtgagtactattcttgcgatgcaaaatatcgc
agttggcttaagattgaactggcaaatgaggaggttttgcctagtgaactctcaaatgaa
gaaaagcagaggaccatggcagtggccagagaaactcttatatcatcattgaagttgcta
agtagaatagataatccttggctggtttcaacacgaggtcatttgcttgaatctatggaa
ccggtatttcttgaattgcatgctacggcagttttatgtttaccctctggtgagtgcata
ctccctgatgctaccttgtgcgcgacattaacaagtgatttctactcatccattagcgag
gaagacattctgcatcgagaattaatggtgaatgtttccatctcaaccagcgataattat
ttcatcaaagtggtccttcgctgcttggcagtggagggtgatgggcttggacctcatgat
ctcaatgatggcggaattctggcagctgtcttggcagctggattcaaaggagagctttct
cgatttcaagctggagttacaatggatatctcccgattggatgcgtggtactcgaacaat
gatggttctttggatgggccagcgacttacatagttcacggtctttgtcgcaagtgttgt
atccctgaaatttttcttcggtgcatgcaggtctcagtttcactgattaagtcaggctat
ccacccgaagggcatcgtgagttaatcgagcttgtcgcatctccaaaaactgattttctt
catctgttcagccagcatcaattgcaggaactcttactattcgagagagagtacaccata
tatgagatggatctcgaggaggaatcagattcttga
DBGET
integrated database retrieval system
