Primulina tabacum: 142554000
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Entry
142554000 CDS
T11246
Name
(RefSeq) histone-binding protein MSI1 isoform X1
KO
K10752
histone-binding protein RBBP4
Organism
ptab Primulina tabacum
Pathway
ptab03082
ATP-dependent chromatin remodeling
ptab03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
142554000
03083 Polycomb repressive complex
142554000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ptab03036
]
142554000
Chromosome and associated proteins [BR:
ptab03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
142554000
Histone modification proteins
HAT complexes
HATB complex
142554000
HDAC complexes
Sin3A-HDAC complex
142554000
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
142554000
PRC2.2
142554000
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
142554000
Heterochromatin formation proteins
Other heterochromatin formation proteins
142554000
Chromatin remodeling factors
NuRD complex
142554000
NuRF complex
142554000
NuRF complex (fruit fly)
142554000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAF1C_H4-bd
WD40
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
WDR55
WD40_RFWD3
EIF3I
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_HPS5
eIF2A
Beta-prop_TEP1_C
Beta-prop_WDR19_1st
Beta-prop_RIG_1st
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
142554000
NCBI-ProteinID:
XP_075520713
LinkDB
All DBs
Position
8:complement(36389283..36392751)
Genome browser
AA seq
426 aa
AA seq
DB search
MGKDEDEMRGEVEERLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKD
YSVQKMILGTHTSENEPNYLMLAQVQLPLEDAENDARLYDDDRSEYGGFGCANGKVQIIQ
QINHDGEVNRARYMPQNSFIIATKTVSAEVYVFDYSKHPSKPPLDGTCNPDLRLRGHSTE
GYGLSWSQFKHGHLLSGSDDAQICLWDINAAPKNKVLDALQIFKIHEGVVEDVAWHLRHE
YLFGSVGDDQYLHIWDLRTPSVTKPIQSVVAHQSEVNCLAFNPFNEWVVATGSTDKTVKL
FDLRKISTALHIFDCHNREEVFQVGWNPKNETILASCCLGRRLMIWDLSRIDEEQTPEDA
EDGPPELLFIHGGHTSKISDFSWNPCEDWVMASVAEDNILQIWQMAENIYHDDDDLPGDD
STNKVS
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaggatgaggatgagatgcggggagaagtggaggagcgtttgataaacgaggag
tacaagatttggaagaagaacactccatttttgtacgatttggtcatcacccatgcgctg
gaatggccctcgctcaccgtcgagtggttgcccgacagggaggagccaccgggcaaggat
tattccgtgcaaaaaatgattttgggaacccatacgtccgaaaacgagcccaattatctg
atgcttgcgcaggttcagcttcccctcgaggatgcggagaatgatgctcgactttacgac
gatgaccgctctgaatatggtggatttggatgcgccaacggaaaggtgcaaattattcag
caaataaatcatgatggggaggtcaaccgagctcgttatatgcctcagaactcatttatt
attgctaccaagacagttagtgcggaagtatatgtttttgactacagcaaacatccatcc
aagcctcctttggatggtacatgcaaccctgatttgaggctgaggggccacagtaccgaa
gggtatggtttatcatggagccagttcaaacatggtcatttactgagtggttctgatgat
gcccaaatatgcttgtgggacataaatgcagctccaaaaaataaggttctcgatgcattg
caaatatttaagattcatgaaggtgtcgtcgaagatgtagcctggcatctgaggcatgaa
tacttgtttggttcagtgggagatgatcaatatctgcatatatgggatctccggactcca
tcagtgaccaagcctatacaatctgttgttgctcatcaaagtgaggtcaactgtctagct
ttcaatccattcaatgaatgggttgttgcaacggggtccactgacaagactgttaaatta
tttgatttgcgaaagatttcaacagcccttcacatatttgattgtcacaacagggaggaa
gttttccaagttggatggaatccaaagaatgagaccatcttagcttcctgttgtcttggc
aggagacttatgatctgggatcttagcaggattgacgaagaacagactccagaggacgct
gaggacggaccaccagagctgttattcatacacggtggtcatacaagtaaaatttcggac
ttttcgtggaacccgtgtgaagattgggtgatggcaagcgttgctgaggataacatacta
caaatttggcagatggcggagaacatttaccatgatgacgatgatttacctggagatgac
tccaccaacaaagtctcctag
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