Primulina tabacum: 142554219
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Entry
142554219 CDS
T11246
Name
(RefSeq) uncharacterized protein LOC142554219 isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
ptab Primulina tabacum
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ptab03041
]
142554219
Spliceosome [BR:
ptab03041
]
Common components
Common spliceosomal components
General mRNP proteins
142554219
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_7
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
142554219
NCBI-ProteinID:
XP_075521022
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Position
8:complement(41235568..41245146)
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AA seq
582 aa
AA seq
DB search
MDFDEYEYLESTVENPEKDRLELKVNGNDGMVESEEKDLSRKLKQRNNDYDRDDSSHPSK
RLRAGKNGTSNREKNRSSHHGSSSRDEEIEKDNNNLNLRNREKEEVSEKERGRNRHRERE
RDRERDKENDRNRNKREYVRGYEGGTKREGERDRLRQSKRFLERHPDEQERESRDVQHSA
DKDNKERRFDREFAGRDRDMRRYKEKKEEGAVADPERDQRTVFAYQISLKASERDVYDFF
SRAGKVRDVQLILDRNSRRSKGFGYIEFYDVMSVPMAIALCGQPLLGQPVMVKPSEAEKN
LVQSTSVTSGESGLGTYSGGARRLYVGNLPVTIKEDQLRQVFEPFGAVELLQMPTDLGTG
NCKGYAFIQFARIEDANAAQNLNGELEIAGRVIKVSAVTEQSGIQNAGPNVTDLDDDDGS
GLSLNAQSRALLMQKLDRTGTVSSPGLSLPLAPLGSSSAHGPSGLAAAVLSIPAVTGPSI
DAVGVPSECLLLKNMFDTHSKAETNFDLDVKEDVQDECSKFGKLKHIYVDKNSAGCVFLR
FENTPSSTAAQRALHGRWFAGKMITASFMVPHDYEAKFPDNS
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atggattttgatgaatacgagtatttggaaagtactgttgaaaatccagagaaggaccgg
ttggagcttaaggtgaatggcaatgatggtatggttgagtctgaagagaaagatctgagt
cggaagctgaagcaaagaaataatgattatgatcgtgatgattctagtcacccatctaag
cgtcttagggcagggaaaaatgggacatctaatcgtgagaaaaatagaagttctcatcat
ggttcatcttcaagagatgaagagattgagaaagacaataataatctgaatctcagaaac
agggagaaggaggaagtgagtgagaaagagagaggcaggaacagacaccgtgaaagagaa
agagatagggagagagacaaagaaaatgatcggaacaggaacaaaagagaatatgtccga
ggctatgaagggggaactaaaagggaaggagagcgagataggttgaggcagagcaagaga
tttttagagaggcatccagatgagcaggaaagggagagtagggatgttcaacatagtgcg
gataaagataataaggaaagacgttttgatagagaatttgcaggtcgagatcgtgacatg
agaagatacaaggagaaaaaagaggaaggggcagtagctgatcctgaacgagatcaaaga
acggtttttgcttatcagatctctttgaaggcaagtgaaagagacgtctatgatttcttc
tctagggctggcaaggtcagagatgtacagctaatattggatcgcaattccagacgctcc
aaaggatttggatacatcgaattttatgatgtcatgtcagttcccatggctatagctctc
tgtggccagcctcttcttggccagccagtgatggttaaaccatcagaggctgaaaagaat
cttgttcaatctacttccgttacttctggtgaaagtggacttggtacatattcaggtgga
gctagaaggctgtatgttggcaatctgccagtcactatcaaagaagatcagcttcgccag
gtgtttgaaccttttggagctgtggaactgttgcagatgcccactgacttagggactggg
aattgcaagggttatgcatttatacagtttgcacgtatagaagatgcaaatgctgctcaa
aatctaaacggggaactggagattgcaggtcgagtaatcaaggtttctgctgtcacggaa
caatctggtatccaaaacgctgggccaaatgttactgatcttgatgatgatgatggcagt
ggcttgtccttaaatgcacagtctcgagcgcttctcatgcagaaattggaccgcaccgga
actgtatcaagccctggcctttccttaccattggcaccactcggatcatcttctgctcat
gggccttctggtttggctgctgcagttctttctattcctgctgttacaggtccatctata
gatgctgttggtgttcccagtgaatgtctgttgctgaagaacatgtttgacacacactct
aaggctgagacaaactttgatctggatgtaaaggaagacgtgcaggatgaatgttcaaag
tttggaaaattaaagcatatttatgtagacaagaattctgctgggtgtgtattcctgagg
tttgaaaatactccatcttcaactgctgcacaacgagcactccacggtagatggtttgct
ggaaagatgatcactgcctcatttatggttccccatgattacgaggctaaatttcctgat
aacagctag
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