Primulina tabacum: 142554860
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Entry
142554860 CDS
T11246
Name
(RefSeq) long chain acyl-CoA synthetase 8-like
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
ptab Primulina tabacum
Pathway
ptab00061
Fatty acid biosynthesis
ptab00071
Fatty acid degradation
ptab01100
Metabolic pathways
ptab01212
Fatty acid metabolism
ptab04146
Peroxisome
Module
ptab_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
142554860
00071 Fatty acid degradation
142554860
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
142554860
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
ptab01004
]
142554860
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ptab04147
]
142554860
Enzymes [BR:
ptab01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
142554860
Lipid biosynthesis proteins [BR:
ptab01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
142554860
Exosome [BR:
ptab04147
]
Exosomal proteins
Exosomal proteins of breast milk
142554860
Exosomal proteins of breast cancer cells
142554860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
142554860
NCBI-ProteinID:
XP_075521636
LinkDB
All DBs
Position
1:complement(58372478..58378727)
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AA seq
718 aa
AA seq
DB search
MDDVGGNFSFSTFKDNGSYGIVCAVIMAVVIPILLAVVLGGKRKAKQRGVLVEVVGGTDL
VMRNARSVKLVEVPWEGATTLAALFEQSCKKNSGEKFLGTRKVIGKEFVTASDGRKFEKL
HLGEYQWETYSQAFTRACNFASGLLKIGHDMDTRAAIFSETCAEWMIAFQACFRQNITVV
TIYASLGDDALIHSLNETRVSTVICDSKQLKKLAAVSSSLKTISQVIYIDDEDTTSGSSA
SEDIGNWRKFYFSEVEKLGSNNPSRPSLPIKKDIAVIMYTSGSTGLPKGVMMTHGNIVAT
AAAVMTVIPGIGSKDVYLAYLPLAHVFELAAETVMLTAGASIGYGSALTLTDTSNKIKKG
TQGDASALKPTLMAAVPAILDRVRDGVLKKVDEKGGFVKKLFNIAYNRRLATIEGSLFGA
WGIESLFWDIVVFKKIRSILGGEIRLMLCGGAPLSGDAQRFINICMGAPIGQGYGLTETC
AGAAFSEWDDPSVGRVGPPLPCCYVKLVSWEEGGYTIVDKPMPRGEIVIGGHSVTAGYFN
NDSKTKEVYEVDERGMRWFYTGDIGRFHPDGCLEIIDRKKDIVKLQHGEYISLGKVEAAV
SSSTYVDSIMVYADPFHNFCVALVVPAHQALEGWARDSGIKYGDFPDLCKKSEAKNEVQQ
SLFKAAKAAKLEKSEIPAKVTLLPEPWTPESGLVTAALKLKRESLKSKFKDELELLYK
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atggatgatgtggggggtaacttttctttttcgacatttaaagacaatggttcatatgga
attgtttgtgctgtcatcatggctgtagttatacctatacttcttgccgtggttcttggg
ggtaaaagaaaggcaaagcagagaggtgttcttgttgaagttgttggtggtactgatttg
gtaatgcgtaatgctagatctgtcaaattggtcgaggttccttgggaaggggctacaact
ttggctgctttgttcgagcagtcttgtaaaaaaaattccggtgaaaagtttcttgggaca
agaaaagtaattgggaaggaatttgttactgctagcgatgggcgaaaattcgagaaactt
catttgggagagtaccagtgggaaacttactctcaggctttcactcgtgcctgtaacttt
gcgtccggtcttcttaaaataggtcatgatatggacactcgtgctgcaattttttctgaa
acttgcgcagagtggatgatagcatttcaggcatgcttccggcagaacatcactgttgtt
acaatttatgcttccttaggggatgatgccctaattcactcacttaatgagactcgagta
tcaactgtgatttgtgactcgaagcaattgaagaagttggctgcagtaagttcgagtttg
aaaaccattagccaggttatttatattgatgatgaagacactacaagtggttccagtgca
tccgaagatattggaaattggagaaaattctatttttccgaggttgaaaaacttggaagc
aataatccttctcgtcctagtctgccaatcaagaaagatattgctgtcatcatgtacaca
agtggcagtacgggccttcctaagggtgttatgatgactcatggaaacattgtggccact
gcagctgccgttatgacagtcattccaggaattggaagcaaagatgtctatcttgcttat
ttgcctttagctcacgtgtttgagttagctgcagagactgtgatgttgactgcaggtgcc
tcaattggctatggctcagcactgacattaacagacacctccaacaaaataaaaaaagga
acacagggagatgcatctgcattgaagcctacattgatggcagctgttccagctattcta
gaccgtgttagagacggagttctgaagaaggttgatgaaaagggaggttttgtgaaaaaa
cttttcaatattgcttacaatcgccgattggcaactattgagggaagcttgtttggtgcg
tggggtatagaaagtctcttttgggatattgttgtttttaagaagataaggtctatcctt
ggaggagaaattcgacttatgctttgtggcggagctcctttgtctggagatgctcagaga
tttatcaacatttgcatgggggcgcctattggtcaaggatatggcttgactgaaacatgt
gcaggagctgccttttcagagtgggatgacccttctgttgggcgtgttggtcctccactt
ccttgttgctacgtcaagctcgtgtcttgggaagaaggtggttatactatagtagataag
ccaatgccacggggagagattgttattggtggacacagcgtgacagctgggtattttaac
aatgattccaaaactaaagaggtgtacgaggtcgatgagaggggcatgcgttggttctac
actggtgatattggaaggtttcatcctgatggatgtcttgagattattgataggaagaaa
gatatcgtgaagcttcaacatggcgagtacatctcacttggaaaggttgaggcagcagtg
tcgtcgagcacatatgttgatagtattatggtctatgcagatcccttccacaacttttgt
gtagccctcgtggtgcctgcacatcaggctcttgagggatgggctcgtgattctggaata
aagtacggggattttcctgatctatgcaaaaagtctgaagcgaagaatgaggttcaacaa
tcacttttcaaggcagccaaggcggctaaacttgaaaagtctgaaattccggcaaaggtt
acgctgttgccggagccatggactccagaaagtggtttggtcactgcagctctgaaattg
aagagggagtcattgaagagcaaatttaaagatgagctcgaactgttgtacaagtga
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