Primulina tabacum: 142554875
Help
Entry
142554875 CDS
T11246
Name
(RefSeq) LOW QUALITY PROTEIN: rRNA (cytosine-C(5))-methyltransferase NOP2C
KO
K21971
methyltransferase NSUN6 [EC:2.1.1.-]
Organism
ptab Primulina tabacum
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ptab03016
]
142554875
Transfer RNA biogenesis [BR:
ptab03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
142554875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
PUA
Methyltransf_31
FtsJ
Methyltransf_25
Ubie_methyltran
Motif
Other DBs
NCBI-GeneID:
142554875
NCBI-ProteinID:
XP_075521637
LinkDB
All DBs
Position
1:complement(58381086..58389132)
Genome browser
AA seq
612 aa
AA seq
DB search
MKKGRSFAKTLHRTFRTLQQQGSSTPKEVIDTGECLCIQMDPSERYCYNPILRWNPKVEE
YFVKAYGTDHFSRISDSLTRPSCYSCVRVNTLKSTSDVVIGKLLAILQERGWQNVSAEEA
IAPRDTMGSAGVPLESTRTSCGPNGSTPSSHLSKCDIPGLDYLVFINGLGPLTVNHKYEE
NKPPKEVIVSRKCAEAVLRGAQVYVPGVLACSAHVEKGDPVAVSVAVEQPGTDGGWGIGF
TRGTVLEGSQTDPYHFERNGLYIGQGTAMMSRAGMFRVSEGVAVDLDDRVFKLPSFHDLL
GGEIFLQNLPSIITAHALDPREGERILDMCAAPGGKTTAIAILMKDKGEVIAVDRSHNKV
LNIQKLAAELGLGCIATYKLDALKSVSRSVDIDTPNLGKNEGIQFSDSSISGTENSSMGG
GYDTPEQLRKLNCTNKVDARNTSRKMRNGPGRNNCLGSRVEKSEGFSTNSFDRVLLDAPC
SALGLRPRLFAGEETIESLRTHAKYQRRMFDQAVQLVRSGGVIVYSTCTINPGENEALVR
YALDTYKYLSLASQNPKVGGPGLVGGCQFPDGYLEEWLKPGEEDLVQRFDPSSSLDTIGF
FIAKFNVGSKDI
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagggaaggagtttcgctaaaacccttcacagaaccttccgaactctccaacaa
cagggaagctccactcccaaggaagtgattgatacgggcgagtgtttgtgcatacagatg
gatccatcggagcgttactgctacaacccaatcttgcgttggaaccctaaggttgaagaa
tatttcgtgaaagcttatggaaccgaccatttctctcgaatttccgattctctcacgcgt
ccttcgtgttactcctgtgtacgggtgaatactctcaaatcaaccagtgatgtcgttatt
gggaagcttttggctattctacaggaaagagggtggcaaaatgtttctgctgaagaagct
attgctcctcgcgatacaatgggtagtgctggggtacctcttgaatctactagaactagt
tgtggtccaaatggttctactccaagttctcacctttccaaatgtgatattcctggtcta
gactacttggttttcatcaatggtttgggaccactaacagttaaccacaagtacgaggag
aacaaacctcctaaagaggtgatagtgagtcggaaatgtgctgaagcggttcttaggggt
gctcaggtgtatgtgcctggtgttttggcctgtagtgctcatgtagagaaaggtgatccc
gtggcagtttctgttgctgtggaacagccgggcactgatggtggatggggaatcggtttt
actcgtgggactgtacttgagggatcacaaacagacccttatcattttgaaagaaatggc
ctctacattggccaaggaaccgctatgatgtccagagctggaatgtttcgggtatctgaa
ggagttgcagtagacttggatgacagagtatttaaactaccttcctttcatgatttactt
ggaggagagatatttcttcagaaccttcctagcatcattacggcgcatgccttagatcct
agggaaggagagaggatactggatatgtgtgcggctcctggagggaaaactacagcaatt
gcgattctcatgaaggataaaggagaagttatcgcagttgatagatctcataataaggtg
cttaacatccagaaattggctgctgaactgggcttaggatgcatagccacttacaaactt
gatgcgctgaaatctgtgagtagatctgttgacatcgatacccctaatcttggaaaaaat
gaagggattcaattctcagattcatcaatatcaggaacggagaatagctccatgggtggt
ggatatgatactcctgagcaattgaggaagcttaattgcacgaataaggttgatgccagg
aataccagccgaaaaatgagaaatgggcctggaagaaataactgtttgggtagtagagtt
gagaaatctgaagggttttcaacaaatagctttgatcgagttctgcttgatgctccttgt
tctgctcttggtctgagacctcgcttgtttgctggagaggagacaattgaatcattacga
acccatgccaagtatcagagacgaatgtttgaccaggctgtgcagcttgttcgctctggt
ggtgttattgtgtattccacatgtaccataaatcctggagaaaatgaagcattagttcga
tatgcattggatacatataaatatctttcattggcatcacagaatccaaaggttgggggc
cctggccttgttggtggttgtcaatttcctgacggatacctggaggaatggttaaaacct
ggtgaagaagatcttgtccagagatttgatccatcttcttcacttgataccataggcttt
ttcattgccaagtttaatgtcggttcaaaagatatctga
DBGET
integrated database retrieval system
