Primulina tabacum: 142554938
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Entry
142554938 CDS
T11246
Name
(RefSeq) ISWI chromatin-remodeling complex ATPase CHR11-like
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
ptab Primulina tabacum
Pathway
ptab03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
142554938
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ptab03021
]
142554938
03036 Chromosome and associated proteins [BR:
ptab03036
]
142554938
Transcription machinery [BR:
ptab03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
142554938
Chromosome and associated proteins [BR:
ptab03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
142554938
RSF complex
142554938
WICH complex
142554938
B-WICH complex
142554938
NORC complex
142554938
BRF complex
142554938
NuRF complex (fruit fly)
142554938
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
Helicase_C
ResIII
HAND
HDA2-3
DEAD
Myb_DNA-binding
DBINO
AAA_14
Motif
Other DBs
NCBI-GeneID:
142554938
NCBI-ProteinID:
XP_075521657
LinkDB
All DBs
Position
9:17890494..17899136
Genome browser
AA seq
1069 aa
AA seq
DB search
MAKSSRAKYSSDESVSNSSEEEDVAMDQVNDEEDEEELEVVARTADDFDEEEEDNSNAAA
AAAAQEEYDEEEDEDVANEMSKREKLRLNEMQRLKKQKIRDMLEAQNAAIDADMNNKGKG
RLKYLLQQTELFAHFAKGDQASSQKKGKGRGRHASKITEEEEDEECLKEEEEGLSGSGNT
RLVAQPSCIQGKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISILGYLHEFRG
ITGPHMVVAPKSTLGNWMNEIKRFCPILRAVKFLGNPDERRYIREDLLVAGKFDVCVTSF
EMAIREKSALRRFSWRYIIIDEAHRIKNENSLLSKTMRLYNTNYRLLITGTPLQNNLHEL
WSLLNFLLPEIFSSSETFDEWFQISGDNDQQEVVQQLHKVLRPFLLRRLKSDVEKGLPPK
KETILKVGMSQMQKQYYKALLQKDLEVVNAGGERKRLLNIAMQLRKCCNHPYLFQGAEPG
PPYTTGEHLIENAGKMVLLDKLLPKLKERDSRVLIFSQMTRLLDILEDYLIFRGYYYCRI
DGNTGGDDRDASIEAFNSPGSEKFVFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQA
QDRAHRIGQKKEVQVFRFCAEYTIEEKVIERAYKKLALDALVIQQGRLAEQKTVNKDELL
QMVRFGAEMVFSSKDSTITDEDIDRIIAKGEEATAELDAKMKKFTEDAIKFKMDDSADLY
AFDDEKDDKFDFKKIVSENWMEPPKRERKRNYSESDYFKQTMRQSGPARPKEPRIPRMPQ
LHDFQFFNTQRLSEIYEKEVRCLMQLHQRNQVKDTIDVDEPEDVGEPLTAEEQEEKERLL
EEGFSTWSRRDFNTFIRACEKYGRNDIISITSEMEGKTEEEVERYAEAFKIRYKELNDYD
RIIKNIERGEARISRKDEIMKAIGKKLDRHKNPWLELKIQYGQNKGKLYNEECDRFMICM
VHKLGYGNWDELKAAFRTSPLFRFDWFVKSRTTQELARRCDTLIRLVERENQEYDERERQ
ARKEKKLAKNTTPSKRSAARQATESPPSTQKKRKQLSMDDHVNSGKKRK
NT seq
3210 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaatcctctcgagccaagtactcctcggatgaatctgtgtccaattcttcggag
gaagaagatgttgccatggatcaggtcaacgacgaggaagacgaggaggagctcgaggtc
gtcgctcgtaccgccgatgattttgacgaggaggaggaggacaactccaacgctgctgct
gctgctgctgctcaagaagaatacgacgaagaagaggatgaagatgttgcaaatgaaatg
tccaaacgtgaaaaactccggctcaatgaaatgcaacggttgaagaagcagaagataaga
gatatgctggaggcccagaatgctgctattgatgctgacatgaacaacaaaggaaagggt
cgtttgaaatatctattacagcagacggagttgtttgctcattttgctaagggtgatcag
gcctcctctcagaagaagggaaaaggaagagggcgccatgcatcaaaaataactgaagag
gaagaagatgaagagtgtctcaaagaggaggaagaaggcctttctggcagtggaaacaca
aggcttgtggcacagccatcttgtattcaaggaaagatgagggattaccaattggctggc
ttaaattggttgataagattgtatgagaatggcattaatggcatacttgctgatgaaatg
gggctcggtaaaacattacaaaccatctctattttgggatacttgcatgagtttagaggg
attacaggccctcatatggttgttgctcctaaatctacacttggcaattggatgaatgaa
atcaaacggttttgtcccattttgcgtgctgtgaaatttcttggaaatcctgatgaaaga
agatatatacgagaggatttactagttgctggcaagtttgatgtttgtgtgacaagtttt
gagatggccattagagagaagtctgccttgcgccgatttagttggcgttatatcattata
gatgaagctcatcgaatcaagaacgagaattctcttctctcaaaaacgatgagactttat
aataccaactatcggcttttaataacaggaacgccacttcagaataaccttcacgaactc
tggtcgctccttaactttttacttcctgagatatttagctcttctgaaacatttgatgaa
tggttccaaatttccggtgataacgatcagcaagaagttgtccagcaacttcacaaggtt
cttcggccattcctccttagaagattaaagtctgatgtcgagaaaggtttgcctcccaaa
aaggagacaatactcaaagtcggcatgtctcaaatgcaaaaacaatactacaaggcgttg
ctacagaaagatcttgaggttgtaaatgctggcggagaaaggaagcgcctacttaatata
gccatgcagctccgtaaatgttgcaatcacccttatttatttcaaggcgctgaacctggc
ccaccttataccactggagaacatcttatagaaaatgctggaaagatggttcttctagat
aaactgcttccaaaattaaaggagcgtgattccagggttttgatattttcacagatgaca
aggctgctggacattcttgaggactacttgatattccgtggatactattattgccgaatt
gatggaaatactggtggagatgatcgagatgcttccattgaagccttcaactctccagga
agtgagaaatttgtctttctactgtcaacaagagccggaggacttggtattaaccttgca
actgctgatgttgtcattctctatgacagtgattggaatccgcaagttgatttgcaggct
caagaccgtgctcatagaattggacagaagaaagaagtgcaagtcttccgtttctgcgcc
gagtacaccattgaggagaaagtgattgagagagcctataaaaagcttgcacttgatgct
ttggttatccaacagggacgattagccgagcaaaagactgttaataaggatgagttgctg
caaatggtgagatttggtgctgaaatggtttttagttcgaaagacagcacaataacagat
gaagatatagatagaattattgccaagggagaagaggctactgctgaactggatgcaaag
atgaaaaaatttactgaagatgctatcaaattcaaaatggatgatagtgctgacttgtat
gcatttgatgatgaaaaggatgataagtttgacttcaagaaaattgtgagtgaaaattgg
atggaaccaccaaaaagagaaaggaagcggaattactctgaatcagattacttcaagcag
acgatgcgtcaaagtggtcctgcaagaccaaaagagccacggattcctcgcatgcctcag
cttcatgatttccagttcttcaacactcagcgtcttagtgaaatctatgagaaagaagtt
cgttgtctgatgcaattgcatcagagaaatcaggtaaaagacacaatagacgtggatgaa
cctgaagatgtgggagagccgttgactgctgaagagcaggaagaaaaggagcggctgctg
gaagaaggattttcaacatggagccggagagacttcaatactttcatcagggcttgtgag
aaatatggtcgaaatgatatcataagtatcacttccgaaatggaagggaaaaccgaggaa
gaggttgagagatatgctgaagctttcaaaattcgatataaagaattgaatgattatgat
aggattattaagaacattgaaagaggagaagctagaatttcaaggaaagatgagatcatg
aaggctattgggaagaaattggaccgccacaagaatccgtggctggaactgaagatccaa
tatggccagaacaaagggaagctgtacaatgaagaatgtgatcgttttatgatatgtatg
gttcacaagcttggatatgggaattgggacgagttgaaagctgccttccgcacttctcca
ttatttcggtttgattggtttgtaaaatctcgtaccactcaagaacttgcaaggagatgt
gatacactcatccgactggtagagcgggaaaatcaagaatatgatgagagggagagacaa
gcacgtaaagagaaaaagttagccaagaacacaactccatctaagcgttccgctgctaga
caggctaccgagagccctccttccactcaaaagaaacggaagcaattgtcaatggacgat
catgtcaactcgggaaagaaaagaaaatga
DBGET
integrated database retrieval system
