Primulina tabacum: 142555514
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Entry
142555514 CDS
T11246
Name
(RefSeq) uncharacterized protein LOC142555514
KO
K19027
zinc finger FYVE domain-containing protein 26
Organism
ptab Primulina tabacum
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptab03400
]
142555514
DNA repair and recombination proteins [BR:
ptab03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
142555514
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_ZFYVE26
TPR_2
Motif
Other DBs
NCBI-GeneID:
142555514
NCBI-ProteinID:
XP_075522518
LinkDB
All DBs
Position
9:34972933..35007484
Genome browser
AA seq
2504 aa
AA seq
DB search
MEDKDTELLSRVTVNHLFLGQFEAFRATLRSLRTRNADLARTILQTVVSRGGNVSQNHPV
LWSDSCPSPAILTFLCTLELLQFPDPTANLWSFDENMLKLRVEFLLYVHIVRSRVLEKVE
DSVNTEGSEEFVVGSSKNDELMVLGRLWEAGLSRLMPDLAVLEEMDEGVLRGLDEREGMK
LRKVILDNSDIFDALCRNIGMQIGQVVKDGSGGLAIALRAEVRRQNVEEEVLRLVQKCVQ
VAHLDAMRQCLGNGDEDGVVLHVRFLRLECGVEEAEYRIVLQDLLKRVLSGKDDYGDKSR
AMRKNLLSIYEEALSSHSTPLLKMLQLIQDDLLSEEIEAHSACEANQIPIPFQRLQKFIS
ETTLETNLNDSSLSLKIATAFCMRDLYHHARVQGFHALETVMDTALSLVQRDQIQEASQV
LMLFPRLQPLVAALGWDLLAGKTRMRRKLMQSLWTSKSQALRLEETSPYANKFDEASCVE
HLCDTLCYRLDVASFVASVNSGQSWSLKSSVLLSGKDLTNDGTEDHNFDPFVENFVLEKL
SVQSPLRVIFDLVPSIRFQDVIELLSLQPISSTAEAWKRMQDIELMHMRYALESAVLAFG
TMEKSTSDGPGDQQMTLSYLKELKNHLETITSIPRKIYMVNIIISLLYMDNLQLEWAPND
PSKRSSKSFNILTGVGQRDVMTQDRGNEMVVSFTGQVLDILRQQLPLSVNDDLDNSLDGR
ILTSGKQALESRILKAKQFIEDWEWRLSILQRLLPLSERQWRWKEALTVLRAAPSTLLNL
CMQRAKYDIGEEAIYRFSLPPEDKATLELTEWVDRAFSKASVEDVVSRAADGSSDQELDF
LSLRSQLGSLAAILLCIDVSAACSKLPKMSLKLLNQAQVMLSEIYPGTAPKMGSTYWDQV
REVAIISIVKRVLKRLSELSEQEKSPALQAIFSGEVILPLSKEFQREGNKERALVMLHQM
IEDAHKGKRQFLSGKLHNLARAIADEETERDHASGESSYSDGRGLPSHDMNVVLGLGLRN
LKQSSLIPEAGESNLTSASYDVKDSEKKLFGPFGSKITTYLSQFILHIAAIGDIVDGTDT
THDFNYFSLVYEWPKDLLTRLVFERGSTDAAGKVAEIMSSDFVHEVISACVPPVYPPRSG
HGWACIPVIPSLPKIYTESKVISPIREAKPMFYTRSSATPGVPLYPLKLDVVKHLVKLSA
VRAVLACVFGSTMLYRGSDPAITSSLNDGLLPSPYDDRFFYEFALDQSERFPTLNRWIQM
QTNLHRVSEFAVMTEHGIDEVKDHSETKTFMKRFRENDTDTESEMDDVGSNLSMPLPELK
DQGNVASDVRHESPRSETVEHDNAVFLSFDWENEGPYEKAVDRLMDEGKLLDALALSDRF
LRNGASDRLLQMLIISMEDDTFSGPSQGSSGFRIWSNSWQYCLRMKDKQRAARLALTYLH
KWELEAALDVLTVCSCHLPDGDPLKIEVVQRKQALCRFKRILCADDRYTSWQEVETDCKE
DPEGLALRLAEKGVVSAALEVAESAGLSIELRRELQGRQLVKLLNADPVSGGGPAEASRF
LSSLHDSEDALPVAMSAMQLLPNLSSKQLLVHFFLKRRDGNLSEVEVSRLNAWALGLRVL
ASLPLPWQQRCSSLHEHPRLILEVLLMRKQLQSASLILKEFPSLRDNSIIVGYAAKAIAI
STSFPARESRISISGPRAKQRTKASTPTRSSFSSSLSNLQKEARRAFSWTPRNAGDKGAP
KDNQRKRKSSGLTQSEKVAWEAMTGIQEDRVSLFTADGQERLPSASIATEWMLTSDLKKD
EAVRSSHRYESAPDVILFKALLSLCSDESAAGKAALDLCSNQMKIVLSSLQLPENASMET
IGQAYHATETFVQGLLFAKSQLRKLSGANDLSGNMSEKGRDADDASSDTGGSSVGTQSTD
ELSEAVSQVDVWLGRAELLQSLLGSGIAASLDDIADKESSQSLRDRLINEERYSMAVYTC
KKCKIDVFPVWSSWGHALIRTEHYAQARVKFKQALQLYKGDSTPVIIDIISTIEGGPPVD
VASVRSMYEHLAKSAPAVLDDPLSADSYLNILYMPSTFPRSERSRRSQEATKDSPAHNSD
LEEGPRSNLDSIRYNECVNYLQEYARQHLLNFLFRHGRYKEACLLFFPSNSVPTPPQPSS
LVAVATSSSPQRPDSLATDYGTIDDLCDLCIDYGAIPVLEEVISSRISTAQDQSVNQHTA
AAVARICLYCETHKYFNYLYKFQVIKKDYVAAGLCCIQLFMNSASQEEALKHLEHAKMHF
DEGLSARYRVSDSTKLVTKGIRGKTASEKLTEEGLVKFSARIAIQMDVVRCFSDAEGQQW
KHSLFGNPNDPETFRRRCEIAETLGEKNFDLAFQVVYEFNLPAVDIYAGVAASLAERKKG
GQLTEFFRNIKGTIDEDDWDQVLGTAINVYANKHKERPDRLIDMLISSHRKVLACVVCGR
LKSAFQIASRSGSVADVQYVAHQALHANALPVLDMCKQWLAQYM
NT seq
7515 nt
NT seq
+upstream
nt +downstream
nt
atggaggacaaggacaccgagctcctctccagagtcaccgtaaaccacttgtttcttgga
caattcgaggcgtttcgggccacgctccggagcctgcgtacccggaacgctgatcttgca
cgaaccattcttcagactgtagtgtccaggggagggaacgtgagtcaaaaccacccggtt
ctttggtccgattcatgcccttctcccgccatcctcaccttcttatgcacactcgaactt
cttcaattccccgaccccacagcaaatctttggtcgttcgatgagaatatgttgaaattg
cgtgtggagtttttgttgtatgtacatatcgtaagatctagggtcttggaaaaagtcgag
gatagtgtaaatacggaagggagtgaggaatttgttgttgggagttccaagaatgacgag
ttaatggttctggggagattatgggaagcgggattgagccgtttgatgcctgatttagca
gttttggaagaaatggacgagggggttttgaggggtttggatgagagggaaggcatgaag
ctgagaaaggtgattctggataattctgatatctttgacgcattgtgtaggaatatagga
atgcaaattgggcaggtggtgaaagatggttcggggggattggctattgctttaagggca
gaggtgaggcgacagaatgtagaggaggaggttcttaggttggtgcagaagtgcgtgcag
gtagcacacctggatgccatgaggcagtgcttgggaaatggtgacgaggatggcgtagtt
ttgcacgttaggtttcttcgtctggaatgtggagttgaagaggctgagtatcgcatagtt
ttgcaagatctccttaagagggtcttatcagggaaggatgattatggagacaaatcacgt
gctatgaggaagaacttgctctctatatatgaagaagcgctttcatctcattccactccc
cttcttaagatgcttcagcttattcaagatgacttgctttctgaagaaattgaggcacac
agtgcttgtgaagccaaccagattcctattccttttcaacgccttcaaaagtttatatca
gaaacaacactcgagacaaatttaaatgactcatcattgtctctgaaaattgccactgct
ttttgcatgagggacttgtatcatcatgctcgtgtgcaaggcttccatgcactggaaaca
gtcatggatactgctctgtctctagtacagcgagatcagattcaagaagcttcccaggtt
cttatgctgtttcctcggcttcaacccctggtagctgccttgggttgggatcttttggct
gggaaaaccagaatgagaagaaaacttatgcagtctctatggacaagtaaatctcaagca
cttaggttggaagagacttctccttatgctaataaatttgatgaggcatcatgtgtggaa
catctttgtgatacattatgctaccggcttgacgttgcttcgtttgttgcctctgtaaat
tctggtcagtcatggagtctcaaatcttctgtacttttatctggaaaagatttaacgaac
gatggtaccgaggatcataatttcgatccatttgtggaaaattttgtgttggagaagtta
tcagtccaaagtcctctccgggtaatttttgatttagttcccagcataagatttcaagat
gtgattgaattgctcagcttgcagccaatttcttcgacagcagaagcttggaagaggatg
caagatattgaactaatgcacatgcgatatgctcttgaatctgctgttctcgcctttgga
acaatggaaaagagtacttctgatggaccaggagatcaacaaatgacattaagttatttg
aaagaactaaagaatcatttggagacgatcacgagcattcctcgcaagatatacatggtg
aacattatcatctcacttctttatatggacaatctccaacttgaatgggcacctaatgat
ccttcaaaaagatcttccaagtcatttaatattctcactggggtgggacaaagagatgtc
atgactcaggaccggggaaatgagatggttgtctcctttacaggccaagtacttgatatt
ttgcggcagcaactaccattatcagttaatgatgatctggataattccctggatggccgt
attttgactagtggtaaacaggccttggaatctagaatcttgaaggctaaacaattcatt
gaagattgggaatggcgtttgtcaattttgcaacgcctcttgccattgtccgaacgccaa
tggaggtggaaggaggctttaactgtgctgcgtgcagcaccatctactctacttaatctt
tgcatgcaaagggcaaaatatgacatcggggaagaagcaatttatcggttttctttacct
ccagaagacaaagcaacattggaattgactgaatgggtggatagagccttcagtaaagct
tctgtggaggatgtggtgtctcgtgctgctgatggtagctctgatcaagaattggatttt
ttgtccttgcgctctcagttgggttctttggcagctattctcctatgcattgatgtatca
gcagcatgttccaagttgcctaaaatgtctttgaagcttctgaatcaggctcaagttatg
ctctctgagatctatcctggtactgctccaaagatggggtcaacttactgggatcaagtt
cgcgaagtggcaattatatctattgttaagcgtgtccttaagcgtctgtccgagctctca
gaacaggaaaagtctccagctcttcaggcgattttttctggagaagtgatacttccatta
tcaaaggagtttcagagagaaggaaacaaagaacgtgctcttgttatgctgcatcaaatg
attgaggatgctcacaagggcaagcggcagttccttagtggtaagctccataatcttgcg
agagcgattgctgacgaagagacagaaagggaccatgctagtggcgagagctcatattct
gatgggagagggcttccaagccatgacatgaacgtagttctggggctcggattgagaaac
ctgaagcaatcatccttgataccagaagctggtgaaagtaatttgacctctgcaagttat
gatgtcaaagattcagaaaaaaaactgtttggaccttttggctccaagatcacaacatac
ctatctcaattcattttacacattgctgctattggtgatattgttgacgggaccgataca
actcatgacttcaactatttttccctcgtgtatgagtggcccaaagatctcttaactcgt
ttggtatttgaaagaggcagcactgatgcagctggaaaggttgcagagataatgagttca
gactttgtgcatgaagttatttctgcttgtgtacctcctgtctaccctccaaggtctggt
cacggatgggcttgcattccagtgattccaagccttcctaagatttacactgaaagcaag
gttatctcacctatcagagaagctaaaccgatgttttatactcgttcttcggccactcct
ggagtcccgttataccctctcaagttggatgtcgtgaaacatcttgtcaagctatctgct
gtcagggcagtccttgcttgtgtgtttggaagtactatgttgtaccgtggcagtgatcct
gctataactagttccttgaatgatggattattaccttcaccttatgacgataggtttttt
tatgaatttgccctggatcaatcagagagatttccaaccttgaatcgctggatacaaatg
caaactaaccttcaccgagtttctgagtttgctgtcatgacagaacatggaatagatgag
gttaaagaccattctgaaaccaaaaccttcatgaagcggtttcgtgaaaatgacactgac
actgaatcagaaatggatgatgttggtagtaacctttcaatgccactgcccgagcttaag
gatcaaggtaacgtggcttctgatgtcaggcatgaatctcctaggtctgaaactgtagaa
catgataatgcagttttcctttcttttgattgggagaatgaaggaccctatgaaaaagct
gtagacagattgatggatgaagggaaattgcttgatgctctagcactgtctgaccgtttc
ttgcgcaatggggcctcagacaggttgcttcaaatgctcattattagtatggaggatgat
actttttccggaccatctcaaggtagctcaggctttcgtatctggagcaatagttggcag
tattgtctacgtatgaaggataaacagcgggcagctagactagctcttacatatttgcac
aaatgggagctggaagcagctttggatgttctcactgtgtgcagctgccatttgcctgat
ggtgatccacttaaaattgaggttgttcaaagaaaacaagccctgtgcagattcaaacgc
attttatgtgcagatgatcgctacaccagctggcaagaggttgagacagattgtaaggaa
gatcctgagggtcttgcacttcgattggccgagaaaggagttgtgtcggccgcgttagaa
gtggccgaaagtgcaggactttctattgaactgcgaagagaactccagggccgtcaactt
gttaagcttctcaatgcagaccctgtaagtggtggaggccctgcagaagcttctcgattt
ctttcttcacttcatgattctgaagatgctttgcctgttgcgatgagtgctatgcaactc
ttgcccaaccttagctccaagcagctgcttgtgcacttctttctaaagagaagagatgga
aatctttccgaagttgaggtctcccggctgaacgcatgggctttaggtcttcgtgtattg
gcctccttgccattaccttggcagcaaagatgctcttccctgcacgaacaccctcgtttg
attctagaagttttgcttatgaggaagcaattgcagtctgcttctctgatactcaaagag
ttcccctcattgagagacaacagcatcattgttggatatgctgccaaagctattgccatt
agcacgagtttccccgctagggaatccaggatttcaatttctggtccaagagcaaaacag
agaaccaaggctagcacacccacaaggtcatcttttagtagcagcttgagtaacttgcaa
aaagaggctcgtcgggcattttcttggactcctcgtaatgcaggagataagggtgcacca
aaagacaatcagaggaagagaaaaagttcaggattgacacaatctgaaaaggttgcttgg
gaggccatgactggtattcaggaagaccgtgtttcattattcaccgcggatggtcaagaa
aggcttccttctgcttctattgctacagagtggatgctaacaagtgatctcaagaaggac
gaagctgtccgttcttctcatagatatgaaagtgcccctgacgtcattctgttcaaggca
ttactctcactatgttcagatgaaagtgctgctggaaaagctgctctggacttgtgtagt
aatcagatgaaaattgtcttgagctctctgcagttgcctgaaaatgcatctatggaaact
attggtcaagcatatcacgcaacagaaacatttgtgcagggtttgctttttgctaaatcc
cagcttagaaaattgtccggggccaatgatttgtctggtaatatgtctgaaaaaggccgg
gacgctgatgatgcatcctctgatacaggcggctctagtgtgggcactcagtcaactgat
gaactctctgaagcagtatctcaggtagatgtgtggcttggacgtgccgaattactgcag
agtcttttgggatcagggatagctgcctcgcttgatgatattgcagataaagagtcatcc
caatctcttagggatcgattgatcaatgaggaacggtatagcatggctgtatatacttgt
aaaaagtgtaagatcgatgttttccctgtttggagttcatggggccatgccctgattcga
acagaacactatgcacaagctcgtgtgaaattcaagcaagctcttcagttatataagggc
gactctacccctgtgattattgacatcattagtactattgaaggaggtcctccggttgat
gttgcatcagtacggtccatgtatgaacatttggctaaaagtgcaccagcagttttagat
gaccctctgtctgctgattcctatcttaatattttgtacatgccttctacatttccacgg
tcagagaggtctaggaggtcccaagaagccactaaggacagtcctgcacataactcagat
cttgaagagggaccacgaagcaacctcgacagtattagatacaatgaatgtgttaactat
ttacaagaatatgctcgtcagcatttgctcaattttctgtttagacatggccgatataag
gaggcttgcctgttgttttttccttccaattccgttcccactccaccacagccatcttcc
ctggttgcggttgctacatcttcttcccctcaacgaccagattctttagcaactgattat
gggacgatcgatgatttatgtgatctgtgcatcgattatggcgccattcctgtcctagag
gaagtgatatcatcaaggatttccacggcacaagatcagtccgtgaatcagcacactgct
gcggcagttgcccgcatctgtctctactgtgaaactcataagtacttcaattatctgtac
aagttccaggtgataaaaaaagactatgttgctgctgggctttgctgtattcagttgttt
atgaactctgcttctcaagaggaagctttaaagcacttggaacatgctaagatgcatttt
gacgaaggcttgtcagcacgatatagagtgagtgattctacaaaacttgtaaccaaaggt
attcgggggaaaactgcttcagagaagcttactgaagaaggattggtcaaattctctgct
cgtattgcgattcagatggatgtcgtgagatgcttcagtgatgcagaaggtcaacaatgg
aaacactctcttttcgggaatccaaatgaccctgaaacattcaggagaagatgtgaaata
gcggagactcttggtgagaagaattttgacttggctttccaagtagtctatgaatttaat
cttccagctgttgacatttatgctggcgttgctgcatcacttgccgagagaaagaaggga
ggacaattaactgagtttttcagaaatatcaagggtaccattgatgaggacgattgggat
caggtcttggggacagcaattaatgtgtatgctaacaaacataaggagcgccctgatcgc
cttattgacatgttgattagcagccacaggaaagtgttggcctgtgttgtgtgtggtcgt
ctcaaaagtgctttccaaattgcatcaaggagtggcagcgtggctgatgttcagtatgtt
gcccatcaggcgttacatgccaatgcacttccagttcttgatatgtgcaagcagtggttg
gcacagtacatgtag
DBGET
integrated database retrieval system
