Primulina tabacum: 142555600
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Entry
142555600 CDS
T11246
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit A-like isoform X1
KO
K07466
replication factor A1
Organism
ptab Primulina tabacum
Pathway
ptab03030
DNA replication
ptab03420
Nucleotide excision repair
ptab03430
Mismatch repair
ptab03440
Homologous recombination
ptab03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
142555600
03420 Nucleotide excision repair
142555600
03430 Mismatch repair
142555600
03440 Homologous recombination
142555600
03460 Fanconi anemia pathway
142555600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ptab03000
]
142555600
03032 DNA replication proteins [BR:
ptab03032
]
142555600
03400 DNA repair and recombination proteins [BR:
ptab03400
]
142555600
Transcription factors [BR:
ptab03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
142555600
DNA replication proteins [BR:
ptab03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
142555600
DNA repair and recombination proteins [BR:
ptab03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
142555600
MMR (mismatch excision repair)
142555600
DSBR (double strand breaks repair)
HR (homologous recombination)
142555600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
zf-CCHC
DUF223
CDC24_OB3
zf-CCHC_3
Motif
Other DBs
NCBI-GeneID:
142555600
NCBI-ProteinID:
XP_075522665
LinkDB
All DBs
Position
9:35621813..35628298
Genome browser
AA seq
859 aa
AA seq
DB search
MPPINLTEGAIALLSSGEAQGTDVKPVLQVADIRLVNTQNQNNNNERYRILLSDGEFTQQ
GMLATQRNELIRSEMLQKGSIVQLTQFVCNLIQNRMIIIIIDLDVILQKCDPIGEPKQYP
NKTDGNAPSIARPTAQVQPANQPVTGSGPQFYASGSAPLPNVGSGIHAPPVMEGRNAGSH
SYNSPISNLDSSRYGSTNAPPQFAKSEPGSGISRAPNSFVRPPQSLHNQPPPMFSNRGPV
AKNEAPPRVIPIAALNPYQGRWTIKARVTSKGELKHYSNPRGDGKVFAFDLLDSDGGEIR
VTCFNAVADQFYNQIEHGRVYMISKGSLKPAQKSFNHLRNDHEIYLESTSIVQPCFEDDK
TIPQQQFHFCPICDIEGLDNNSVVDVIAVVSSINPSTSIMRKNGQETQKRTLQLKDMSGR
SVELTLWGNFCNAEGKTLQNMCDSGVFPVLAVKSGRVNDFNGKSLGTISTSQLFIEPDFL
EAHKLRTWFDNDGKNTTSLSISRDTNFVRTDTRKTVSQIKDEKLGTSEKPDWIAVSATLT
FMKVDNFCYTACPIMIGDRQCNKKVTNNGDGKWRCDRCDKFVDECDYRYILQMQIQDHTG
LTWVTAFQETGEEILGISAKDLYYLKYEEQDDDRFSELIRNVLFTKLIFKLKVKEETFSD
EQRVKSTVVKADKVNFLTETKYLLDLIAKFKEEDSGSLPLKSEKPIAVSGLNHSGFGSGS
RESAASAMNYSGSNINVARDTPGQMGMYVNQYSGPQLPPTSSAGMHMSCNSCGASGHSSA
NCPSVMGGPGQQSYGGGFDNKVTPRPSSGGASSECIKCHQLGHWAKDCPNSNNVPPAYGS
SNATPGRYGTASKQYVGGF
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
atgccgccgattaatttgacggagggcgcgattgcgctgctctcgagcggcgaagcgcag
gggacagacgtaaaacccgtgcttcaagtcgccgacatacgtttggtgaacacacagaac
cagaacaataacaatgaacggtatcggatcctgttgtcggacggggagttcactcagcaa
ggcatgctcgcgactcagcgaaacgaattgatacggtctgaaatgctgcagaaaggttcc
attgtgcagctgacgcagttcgtttgtaatcttattcagaatcgcatgattataatcatt
attgatctggatgtgatactacaaaaatgtgatcctattggtgaaccaaagcaatatcct
aacaagactgatggaaatgccccttcaattgctagaccgacagcacaggttcagccagca
aaccagccagttactggaagtggtccacaattttatgcttctggttcagctccactgcca
aatgtgggcagcggaattcatgctcctcctgtgatggaaggccgaaatgcaggctcacac
tcttataattctcccatcagcaatcttgactctagcagatatggttcaacgaatgcacct
ccacagtttgctaaatcagaacctggttctgggatttctcgggctcctaacagttttgtc
aggccgcctcagtcacttcataatcaaccgcctccaatgttctccaacaggggtcctgta
gctaaaaatgaagctcctccaagagttattcctatcgctgcactgaatccttatcaagga
agatggacgattaaggccagagtgacgtccaaaggggaactcaagcactacagcaatcct
cgaggtgatggtaaagtatttgcattcgatcttcttgattctgatggaggagaaataaga
gtaacatgcttcaatgctgtggcagatcagttttacaatcaaattgagcatggtagagtt
tatatgatttctaaaggttctctaaagcctgctcagaaatcttttaatcacctacgtaat
gatcatgagatttatctggagagtacttcaattgtgcagccctgctttgaggatgataaa
accatcccgcagcagcaatttcatttttgccccatatgtgacattgaaggcctagacaac
aacagtgtagtagatgtgattgctgttgtttcttctatcaatccatccacctcaataatg
aggaaaaatggtcaagaaactcagaaaagaactctccaactcaaagacatgtcaggcaga
agtgttgaattaactttgtggggaaacttttgcaatgcagaaggtaaaacacttcagaac
atgtgcgattctggagtatttcctgttttggctgtgaaatctggtagagtgaatgatttt
aatggaaaatctttgggaaccatttccactagccagctgtttatagagccagattttctt
gaagctcacaaactcagaacatggtttgacaatgatggaaaaaataccacttctttatct
atatcaagggacacaaattttgtccgaactgatacacggaaaactgtgtctcagattaaa
gacgaaaaattagggacttccgagaagcctgattggattgctgtctctgccaccctcacg
ttcatgaaagtggacaacttctgctatactgcatgccccatcatgatcggggatcgtcag
tgcaacaaaaaggttacaaataacggggatgggaaatggagatgcgacagatgtgataag
tttgttgatgaatgcgattatagatatattctccagatgcaaatccaggatcacactggg
ttaacatgggtgactgcatttcaggaaacaggagaggagatattgggaatatcagcaaaa
gacctgtactatttgaaatacgaagaacaagatgatgatagattttctgaactgatacgg
aatgttctgtttaccaaattaatattcaaattaaaagtcaaggaagagacttttagtgac
gaacagcgtgtcaagtcaacagtcgtcaaagcagataaggtgaatttcctaaccgagacc
aaatatcttctggacttgattgcgaagttcaaagaagaggactcaggttctttacctctt
aaaagtgagaaacccattgcagtatccggactgaatcacagtggatttggtagtggaagc
agagaatcggcagcatctgctatgaactacagtggaagtaacatcaacgtggccagagac
acacctggtcagatgggcatgtacgttaatcagtatagtggtccacaacttccccctact
agctctgctggtatgcatatgagttgtaatagctgtggtgctagcggtcatagctctgca
aattgtcctagtgttatgggtggtccagggcaacagtcttatggaggtggttttgacaat
aaggtgaccccaaggccgagttctgggggtgcatccagcgaatgcatcaaatgccatcaa
ttgggacactgggctaaggattgtcccaattcgaacaatgttcctccagcttatgggagc
agtaacgcaactccgggtagatatggtacagcatcgaagcaatatgttggcgggttttga
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