KEGG   Primulina tabacum: 142555682
Entry
142555682         CDS       T11246                                 
Name
(RefSeq) replication factor C subunit 2
  KO
K10755  replication factor C subunit 2/4
Organism
ptab  Primulina tabacum
Pathway
ptab03030  DNA replication
ptab03410  Base excision repair
ptab03420  Nucleotide excision repair
ptab03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:ptab00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    142555682
   03410 Base excision repair
    142555682
   03420 Nucleotide excision repair
    142555682
   03430 Mismatch repair
    142555682
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ptab03032]
    142555682
   03036 Chromosome and associated proteins [BR:ptab03036]
    142555682
   03400 DNA repair and recombination proteins [BR:ptab03400]
    142555682
DNA replication proteins [BR:ptab03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    142555682
  DNA Replication Termination Factors
   ELG1-RFC complex
    142555682
Chromosome and associated proteins [BR:ptab03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    142555682
DNA repair and recombination proteins [BR:ptab03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     142555682
  Check point factors
   HRAD17(Rad24)-RFC complex
    142555682
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 AAA_14 nSTAND_NTPase5 AAA_lid_RFC1 AAA_22 Mg_chelatase Rad17 AAA_16 RuvB_N RCF1-5-like_lid AAA_5 Viral_helicase1 nSTAND3 AAA_assoc_2 AAA_25 ResIII AAA_28 AAA_30 AAA_11 AAA_19 DNAX_ATPase_lid AAA_18 ABC_tran IstB_IS21 MeaB bpMoxR RNA_helicase AAA_24 AAA_3 AAA_7 NPHP3_N KTI12 SLFN-g3_helicase NTPase_1
Other DBs
NCBI-GeneID: 142555682
NCBI-ProteinID: XP_075522836
LinkDB
Position
9:36339664..36342578
AA seq 331 aa
MASSSSSAPGPEMPWIEKYRPSKVADIVGNEDAVSRLQVIARDGNMPNLILAGPPGTGKT
TSMLALAHELLGPNYREAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIIILDEA
DSMTSGAQQALRRTMEIYSNSTRFGLACNTSAKILEPIQSRCALVRFARLSDQEILSRLM
VVVAAEKVPYVPEGLEAIIFTADGDMRQALNNLQATNSGFCFVNQENVFKVCDQPHPLHV
KNMVRHVLEGKFDDACAGLKLLYDLGYSPTDIITTLFRIVKNYDMAEYLKLEFMKETGFA
HMRICDGVGSYLQMCGLLAKLSLVRETARAA
NT seq 996 nt   +upstreamnt  +downstreamnt
atggcttcgtcatcttcatccgccccgggccctgaaatgccgtggatagagaagtatcga
ccatccaaggtggcggatatagtcgggaatgaggacgccgtctcccgtctccaagtcatc
gcgcgtgatggcaacatgcccaatctcattctagctggtcctcctggaactggtaaaact
actagtatgttggcgcttgcgcatgaacttctaggaccaaattatagagaggcggtttta
gagctaaatgcatccgatgaccgagggattgatgtggtgagaaacaaaataaagatgttt
gcccagaagaaggttacattgccccctgggagacacaaaataataattttggatgaagct
gacagcatgacatctggcgctcaacaagctttgaggaggacaatggaaatatattcgaat
tcaactcgttttgggcttgcttgcaacacatctgcaaagattctagagcctattcagagt
agatgtgctcttgttcgatttgctagattatctgatcaagagatcctcagtcgtctgatg
gtggtggttgctgcagaaaaggtaccctatgttccagaaggtcttgaagccatcatcttc
accgctgacggtgatatgagacaggcattaaataacttgcaagccacaaacagtggattt
tgttttgtcaatcaagaaaatgttttcaaggtttgtgatcaaccacatcctttgcatgta
aagaacatggtacgtcatgtactcgaggggaaattcgatgatgcatgtgctggtttaaag
ctgctctatgatttgggctattctccaactgacataatcactacccttttccgtatcgta
aagaactacgatatggcagagtatctaaagttggaattcatgaaagaaactggatttgct
cacatgagaatctgcgatggagttggttcatatcttcagatgtgtggtttacttgctaag
ctctcactggtacgtgaaactgcccgagcagcttag

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