Primulina tabacum: 142556003
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Entry
142556003 CDS
T11246
Name
(RefSeq) uncharacterized protein LOC142556003 isoform X1
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
ptab Primulina tabacum
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
142556003
Enzymes [BR:
ptab01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
142556003
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Gene cluster
GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
CarbopepD_reg_2
Sipho_Gp37
Motif
Other DBs
NCBI-GeneID:
142556003
NCBI-ProteinID:
XP_075523315
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Position
1:complement(59324998..59331654)
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AA seq
682 aa
AA seq
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MKEEGGMEKMGGRRKFRKLLNKLCGCVFGHSVGVVQNSGIGAMSPLGVHLSIQDRHVVVD
NGILQVTLSNPEGIVTGIRYNNIDNLLEVLNDESNRGYWDVVWNALDGSSKAGVFEVIKA
TNFTVIKESEDQVEISFSRQWDPSLEGRLVPLNIDKRFILLRGCSGFYTYAIYEHIGSKE
WPAFSLGETRIAFKLRKDRFHYMALADNRQRDMPLPDDRLPGRGQPLSYPEAVLLVNPVD
PKLKGEVDDKYQYSCDNKDLKVHGWISVDPPVGFWQITPSDEFRSGGPLKQNLTSHVGPT
TLAVFLSAHYAGDDLVPKFGQGEPWKKVFGPVFIYVNSVMDGENPLSLWDDAKQQLSVEV
QSWPYTFPASEDFQSSDHRGNVRGKLLVSDRYVSCDDIPANGAYIGLAAPGEVGSWQREC
KDYQFWTRADENGYFSINNIRTGDYNLYAWVPGFIGDYRNGSSITITPGHDLDMGDIVYE
PPRDGLTLWEIGIPDRSAAEFYVPDPDPKYINKLYANHPDRFRQYGLWDRYSELYPSQDL
VYTIGKSDYGKDWFFAHVNRKKEDNTYQGTTWQIKFTLDSVVENGTYKLRVALASASLAE
LQVRINNPDTNRPLFSSGLIGRDNAIARHGIHGLYRLYNVDIKDESLVEGENTVYLTQPR
SASPFQGLMYDYIRLEAPSSNY
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaggagggaggaatggaaaaaatgggtggtcgacgaaagttcaggaaattactg
aacaaattatgcggatgtgtatttgggcactctgtaggtgttgtgcaaaatagtggaatt
ggagccatgtcgcctttaggggttcatttgtctattcaagatcgtcatgtggtggtggac
aatggcatacttcaggtcacattatcgaacccagaaggaattgttactggaatacgctac
aacaatattgacaatttgctagaggttctcaatgatgagtctaacagagggtactgggat
gttgtatggaacgctctagatggaagttccaaagcaggagtctttgaagtgatcaaggca
acaaatttcacagttataaaggaaagtgaggatcaagtggagatttctttctcaagacaa
tgggatccctctctcgaaggcaggcttgttcccttaaatatagacaaaaggtttattttg
ctgcgaggctgctctggcttctacacttatgcaatatatgaacacataggctcaaaggaa
tggccagctttcagccttggtgaaactaggattgcttttaaacttcggaaagataggttt
cactacatggcattagcagacaacagacaaagagacatgccactacccgacgatcgatta
cctggaagaggccaacccctttcctatccagaagcagtccttcttgttaatcctgtggat
cctaagctaaaaggagaagttgatgacaagtaccagtactcctgtgataacaaagaccta
aaggtccatggctggatatcggtagaccctcctgtgggattctggcagatcacacccagt
gacgagttccgttctggcgggcctctcaaacagaatcttacctcccatgtgggacccaca
accctcgctgtgtttcttagtgctcactatgctggggatgatctggttcccaaatttggt
cagggcgagccgtggaagaaggtttttggccctgttttcatctatgttaattctgtgatg
gatggagagaacccgttaagcctatgggatgatgcaaagcaacagttgtcagttgaggtc
caaagctggccatacacttttccagcatccgaggacttccaatcatctgaccatcgtggt
aatgtcaggggaaaattattggtttcagacaggtatgttagctgtgatgatattccagca
aatggtgcatatattgggttggctgctccaggagaggtgggatcctggcaaagagaatgc
aaggactatcaattttggacaagagcagatgagaatggctatttttccatcaacaatatt
cgcactggagactacaatctatatgcatgggtccctggcttcattggagattatcgaaat
ggaagttccattaccattaccccaggtcatgatcttgacatgggtgatattgtttatgag
ccacctagagatggcctgacattgtgggaaataggcattcccgatcgttctgctgctgag
ttttatgttcccgatcctgacccaaaatacatcaacaaactttatgccaatcatccggac
aggtttaggcagtatggactgtgggatagatactccgagttatatcccagtcaagacttg
gtgtacacaattggaaaaagtgactatggaaaagattggttttttgcacatgttaacagg
aagaaagaagacaacacctatcagggaactacttggcagattaagttcactcttgactct
gttgtcgagaatggaacatataaacttcgcgtggcactggcatcagcttctctcgctgaa
ctccaggttcgaatcaacaatcctgacacaaaccgtccattattttcaagtggtctgatt
ggaagggacaacgccattgcgaggcatgggattcatgggctctaccggctgtacaatgta
gatataaaggatgaatcgcttgtcgaaggggagaataccgtatacttgacccaaccaagg
agtgcaagtcccttccaggggcttatgtatgattacattaggcttgaagctccatcctcc
aactattga
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