Primulina tabacum: 142556048
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Entry
142556048 CDS
T11246
Name
(RefSeq) serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
ptab Primulina tabacum
Pathway
ptab03015
mRNA surveillance pathway
ptab04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
142556048
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
142556048
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ptab01009
]
142556048
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptab03019
]
142556048
03036 Chromosome and associated proteins [BR:
ptab03036
]
142556048
Protein phosphatases and associated proteins [BR:
ptab01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
142556048
Messenger RNA biogenesis [BR:
ptab03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
142556048
Chromosome and associated proteins [BR:
ptab03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
142556048
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40
Beta-prop_IFT122_1st
Beta-prop_WDR5
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_RIG_2nd
WDR55
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR90_POC16_2nd
DSE1_N
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_1st
Motif
Other DBs
NCBI-GeneID:
142556048
NCBI-ProteinID:
XP_075523368
LinkDB
All DBs
Position
9:39131837..39138799
Genome browser
AA seq
515 aa
AA seq
DB search
MNGGDGGEAAAATAGPPAPLEWKFSQVFGERTAGEEVQEVDIISAIEFDKTGNHLATGDR
GGRVVLFERTDTKEHGRNRKDLEKMDYPISRHPEFRYKTEFQSHEPEFDYLKSLEIEEKI
NKIRWCQTANGAVFLLSTNDKTIKFWKVREKKVKKISELNVDPSKVCCAASSSDSSSHKQ
HLSNGSYSDRYYNFPRNDGLSLPSDSIHSLRLPMITSAESSLVARCRRVYAHAHDYHINS
ISNNSDCETFISADDLRINLWNLEISSQSFNIVDVKPANMEDLTEVITSAEFHPTHCNML
AYSSSKGSIRLIDLRQSALCDSHSKLFEEQEAPGSRSFFTEIIASISDIKFAKDGRHILS
RDYMTLKLWDINMDSGPVATFQVHEYLRPKLCDLYENDSIFDKFECCLSGDGLRVATGSY
SNLFRLFGCSADSTEATTLEASKNPMRRQIQTPSRPARSLSSSITRVVRRGSESPGVDSN
GNSFDFTTKLLHLAWHPSENSIACAAANSLYMYYA
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgaacggtggtgatggtggagaggcagcggcagctacggcgggtccaccagcgccgctg
gaatggaaattttctcaggtatttggggagaggacggctggcgaagaagtgcaagaagtc
gatataatatctgcaattgagtttgacaaaactggcaaccaccttgctactggtgaccgc
ggtggaagggtggttttatttgaaaggaccgataccaaggagcatggaagaaatcgaaaa
gatttagagaagatggactacccaataagtcgacatccagagtttcgttacaaaactgaa
tttcagagccatgaaccagagtttgattatctgaagagtttggaaatcgaggagaagatc
aataagatacgctggtgccaaacagctaatggagccgtctttcttttgtccactaatgac
aaaaccattaagttttggaaggttcgagaaaagaaagttaagaaaatttctgaattgaat
gttgatccttctaaagtttgctgtgctgcaagttctagtgattcttctagtcataagcag
catctttctaatgggagctattcagatcgatattacaactttccaagaaatgacggactg
tccttgccttctgacagcatccattcactgagattacctatgattacaagtgctgagagc
agtctcgttgcaagatgtaggagagtttatgctcatgcccatgactaccatatcaattcg
atctcaaataacagtgattgtgaaacatttatatcagctgatgatcttagaatcaatctc
tggaacttggaaataagcagtcaaagcttcaatattgttgatgtgaagccagcaaatatg
gaggacctaactgaggtgataacatcagcagaattccatcctactcattgtaatatgtta
gcatatagtagttcaaaaggatccattcgtcttattgatctgcggcaatcagctttgtgt
gattcacattctaaactatttgaggagcaggaggcgcctggatcgaggtcatttttcact
gagatcattgcttcaatatcagatattaagtttgccaaggatggaagacatatacttagt
cgtgattacatgaccctaaagctgtgggatatcaatatggattctggcccagtagcaact
ttccaggttcatgaatatttaagacccaagctgtgcgacttgtatgaaaatgattctatt
ttcgataaatttgaatgttgcctcagcggcgacggtcttcgggtggcaactggttcttac
agcaatctgttccgcctgtttggttgtagtgcggacagcactgaagcaaccactttagaa
gctagcaaaaacccaatgagaaggcagattcaaaccccttcaagacctgccagatcactg
agcagcagcattactcgagttgttagacgaggctcagaaagtcctggagttgactccaat
ggaaattcgtttgatttcactacaaagctgcttcaccttgcatggcacccatcagaaaac
tcaatagcctgtgctgctgcgaatagcctgtacatgtactatgcataa
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