Primulina tabacum: 142556080
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Entry
142556080 CDS
T11246
Name
(RefSeq) LOW QUALITY PROTEIN: protein REDUCED CHLOROPLAST COVERAGE 3-like
KO
K03255
protein TIF31
Organism
ptab Primulina tabacum
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
ptab03012
]
142556080
Translation factors [BR:
ptab03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
142556080
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_12
eIF3_p135
TPR_10
TPR_NPHP3
CLU_N
TPR_2
PAM2
TPR_MalT
TPR_9
TPR_8
Motif
Other DBs
NCBI-GeneID:
142556080
NCBI-ProteinID:
XP_075523432
LinkDB
All DBs
Position
9:39401669..39414159
Genome browser
AA seq
1700 aa
AA seq
DB search
MAPRSSKGKGNHKGKTTEKKKKKEEKVVPHLLEMVIVTPYDSQVVLKGISTDKIIDMKKL
LAANVETCHFTNYSLSHEVKGHKLNDKVEVANLKPCLLRMVEEDYTESSLAVAHVRRLLD
IFACTTRFAKHKGGGAESRSKKNKIQPSATDGEARSPENPPPAISDFYGMAAIHPTPRLS
DFYEFFSFSQLSPPILHWKIMKIKDGEARKDGDYFVMQIKICNGKIVQVIASVKGFYTVG
KQLLRSRSLLDLLQQQSRAFANAYASLMKAFVERNKFGNLPYGFRANTWLLPPSVADSVS
NFVPLPAEDESMGGNGGGHGRFGEYDSRPWATDFAILASMPCKTEEDRVIRDRKAFLVHN
LFLDVSIFKAVSAIQKVIDSTPQRETNFSPGSVVHESRIGDLSIIVERDDADAGLKSGSK
ILGSMTFNESANEVSRRNLLKGVTADENVVIHDISSLGVVVVRQCGYAATVKVNGDVKKG
RSCMQDIEIEEQPDGGSNALNINSLRVILMDPCSEASVGGQALXTSFKDVESSRCLVQKV
IKEGLKRLVDNPAITERCIRWELGSCWVQHLQKQETPADNKSGDHEDDKKTQSLVKGLGI
KFKMLKKRDKRTPSDGSKDEANDADASDLHMDSNMGEINTCDSDGVVDLLKYVPQEAFSR
LKETGIGLHTKSVDELIKMVHTYYVDVALPKLVMDFASLELSPVDGRTLTDFMHLRGLQM
RSLGHVVELAEKLPHIQSLCIHEMIARAFKHVIRAVIASVQSKDTLSTAIASTLNFLFAS
NNVGDNGLNDQILKLQWLRIYLEKRFGWRMRDEFQHLRKLSILRGLCHKIGLELVPKDYD
LESSTPFKNSDIISIVPVCKYVGCYSADGRTLLESSKIALDKGKLEDAANYGTKALAKMI
AVCGPYHRTTACAYSLLAVVLYHTGDFNQATIYQQKALDINERELGLDHPDTMKSYGDLS
VFYYRLQHIELALKYVNRAMYLLHFTCGLSHPNTAATYINIAMMEEGIGNVHVALRYLHE
ALKCNQRLLGADHIQTAASYHAIAIALSLMEAYSLSVQHEQTTLKILQAKLGAQDLRTQD
AAAWLEYFESKALEQQEAARNGTPKPDASIASKGHLSVSDLLDYINPDEQSKAADTMRKR
QTKFTPVRDKLNEEELGGNNEIAPGSGSTEISTTVEESNAFDTKLSQQSSKSIESTISDH
QLSEETQEANSDGGWQEASSKGRSGNSAVKKFTRKHPELAKLKINSVYSNFKDSRYRNEA
VSQGHQTTFKASFAEVSPLKKTSTASLNRIDDSNRVPLKSSTSKISPTSASKDSPVPATL
PAMASKSLSYKEVAAAAPGTVLKPFLERAEELCEENSDDHMCFSSKETPQQERRNEVSLD
GLCESLPDDEGIKGDNQGEIYENESPLENSSSDTEDSSCSSNQEKSAETNGSKLSAAAQP
FSPGPYPLPNAAPSIYKVTGSQGMLVELQGFPSVAARVPCGPRLPIYYRAGHTFRIRHGF
SNYPIPIVGENGFTSSKTMNPHAPEFVPRKAWQTNVAVEASSPSIDSNVTVPPLSNREEL
NRTITSSISRETSKKSSFDAKKEELARQILFSFIVKSAQNSSDPPNTIPASGKKYDTSTS
PAEAIANDSAIIKILYGNERNKESVPDNNNNQRLRMKNVKNGSRDREGFVLVTKRRRNRR
QLTNDVNDLYNHQSICASAR
NT seq
5103 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgaggtcatctaaaggaaaggggaaccacaaaggtaagacgacagagaagaag
aagaagaaagaggagaaagttgttcctcatctgcttgaaatggttatcgtcactccctat
gatagccaagttgttctcaagggtatatcgactgataaaataatcgatatgaagaagttg
ttggctgctaatgtggagacatgccacttcacaaactattctctttctcacgaggtgaag
ggacacaaattgaatgacaaggttgaggttgctaatctgaagccttgtttgctgagaatg
gttgaagaggactataccgagtcgtcgttggcagttgcccacgtacggaggctcctggac
atcttcgcgtgcaccacacgcttcgccaagcataagggcggcggggcggagtcccgttcg
aagaaaaacaaaatccagcctagcgccaccgatggagaagcaaggtccccggagaatccg
cctcccgcgatatcggatttttacgggatggcggcaatacatccgactccgaggctctca
gatttctacgagttcttctctttctctcagctatcccctccaattctacattggaaaata
atgaaaattaaagacggagaagcaaggaaagatggcgattacttcgtaatgcagattaag
atatgcaatgggaagatcgtacaagtgatagcatctgtgaaaggattctacactgtgggg
aaacaacttttgaggagccgttccttgctggatcttttgcaacagcaaagccgagctttt
gccaatgcgtatgcatccttgatgaaagcatttgtggaacgcaataagtttggcaacctt
ccatacggattccgtgcgaatacctggcttctccctccgtctgtcgctgattcagtttca
aactttgttcccttgccggcagaggatgagagtatgggaggaaatggtggaggccacgga
cgatttggagagtacgacagtagaccatgggcaacagactttgcaatattggcaagcatg
ccttgcaaaactgaagaagacagggtgattcgagatagaaaggcgtttttggttcataat
ctttttcttgatgtttccatatttaaagctgtttcagctatacagaaagtgatcgattcc
actccacagcgcgagacaaatttcagtcctggttcagtcgtgcatgagagtcgcatcggt
gacctttcaattattgtcgaaagagatgacgcagacgcaggcttgaaatctggatccaag
attttaggcagtatgacattcaatgaatctgctaatgaagtttctcgaagaaatctacta
aaaggtgtaactgcagatgaaaatgtagtaatacatgacatttcttccttgggtgtagtt
gttgtcaggcagtgcggctacgccgcaactgtcaaggtcaatggagatgttaaaaagggt
aggagttgtatgcaagatattgaaattgaggagcaacccgatggtggcagcaatgcactt
aacatcaacagtttaagggtaattctcatggatccatgttctgaagcatccgtcggaggc
caggctcttncaacctcatttaaggatgttgaaagttcaagatgtctggtccagaaagtt
attaaagagggtctgaaaaggttagtggacaatcctgctataaccgaaaggtgtatcaga
tgggaacttggttcttgttgggtgcagcatctacaaaagcaggaaacacctgcagataac
aaatctggagatcacgaggatgacaagaagactcaatcactggtcaaaggacttgggata
aaatttaaaatgctaaagaagagggataagagaacacctagtgatggtagtaaggatgaa
gcaaatgatgctgatgccagcgatctgcacatggatagcaacatgggagagataaatacc
tgtgattctgatggtgtagtggacttgctgaaatatgttcctcaagaggccttttcacgt
ttgaaagaaactgggattggccttcatacaaagtcagtggacgagctgatcaagatggtg
cacacgtattatgttgatgtagctctgcctaagctggtgatggactttgcctcacttgaa
ctttctccagttgatggtcgtacactgactgacttcatgcatcttagagggttacaaatg
cgctccttaggccacgtggttgaacttgctgagaagcttcctcatatacagtctctttgt
atacatgagatgattgctcgagcttttaagcatgtaattcgagctgttattgcttctgtt
cagagtaaagatactctgtccactgcaattgcctcgaccttaaatttcttgtttgcctct
aacaatgtcggggataatggcctcaatgatcaaattctcaaactgcaatggctgcgaata
tatttggagaaaagatttggttggagaatgagagatgagttccaacatttgagaaagcta
tcaattctcaggggactttgtcacaagattggattagagttggttcctaaagactatgat
ttggaaagctctacgccgttcaagaattctgatatcatcagtatagtgccagtctgcaag
tatgtagggtgctattctgctgatgggagaactctacttgagtcatccaagattgctcta
gacaagggaaagctagaagatgctgctaactatgggacaaaggctctggcaaagatgatt
gctgtttgtggtccatatcatcgtacaactgcatgtgcttacagtcttctagctgttgtt
ctatatcacactggagattttaatcaggctacgatatatcagcaaaaggcattagatatc
aatgagagggagctggggcttgatcatcccgacacgatgaaaagctatggcgatctatct
gtgttttactatcgtctccaacacattgaattggctttaaaatatgtcaatcgtgctatg
taccttcttcattttacgtgtgggctgtctcacccaaacaccgcagctacttacatcaac
attgctatgatggaagaaggtatcggaaatgttcatgtcgctctcagatacttacatgaa
gcacttaagtgcaaccagagattattaggagcagatcacatacagactgctgctagctat
cacgccatagcaatagcactttctttgatggaagcctactcactcagtgttcaacacgaa
caaactacattaaaaattcttcaggctaagctaggagctcaggatcttcgaactcaggat
gctgctgcatggcttgaatattttgaatcaaaagccttggaacagcaagaagcagctcga
aatggaacacctaaacctgatgcttccattgccagcaaaggtcatctaagtgtgtcagat
ctccttgattatataaatcctgatgagcagtcaaaagctgcagataccatgaggaaacga
caaaccaagtttactccagttcgtgataaattgaatgaagaggagttgggaggaaacaat
gaaattgcccctggaagtggaagtacagaaattagtaccacagttgaggaaagtaacgct
tttgataccaaactctctcaacaatcatccaagtccattgaaagcacaataagtgaccat
caattgtcagaagaaacccaagaagcaaactcggatggaggatggcaggaagctagctca
aaaggtcggtcaggaaacagtgctgttaaaaagtttaccagaaagcacccagagcttgcc
aaattaaagataaattctgtctactcaaactttaaggacagcaggtatagaaatgaagct
gtatctcaagggcatcagacaacattcaaggcaagttttgctgaagtgtctccattgaag
aaaaccagcactgccagcttaaacagaattgatgattccaatagagtgcctctaaagagt
tcgacgagcaaaatttctcctacatcagcatctaaagattctcctgtccctgccactctg
cctgcaatggcttcaaaatcattgtcttacaaagaagtagcagcagctgcaccaggtacg
gttttaaagccttttctggagagagcggaagaattatgtgaggaaaatagtgatgatcac
atgtgctttagttcaaaagagacaccacagcaggaaaggaggaatgaagtttctttagat
ggcttatgtgagtcactaccggatgatgaaggtataaaaggggacaaccaaggtgaaatc
tacgaaaatgaatcccctttggaaaattcctcctcggatactgaagacagttcatgttct
agtaaccaggagaaatctgcagagacaaacggaagcaaactttctgctgctgctcagccc
ttcagtccaggtccctaccctttgcctaatgctgcaccaagtatctacaaggttacagga
agccaaggcatgcttgtagagctccagggattcccatcagttgcggcaagagttccttgt
ggacctaggttacctatctattacagagcaggtcatactttccggataaggcatggtttc
tcaaattacccaatccccattgttggggaaaatggtttcacttcttccaagaccatgaat
ccacatgcacccgaatttgttcctcgaaaagcatggcaaacgaatgtagctgtggaagct
tcaagcccgtctattgattctaatgtcactgttccaccactttcaaatagagaggagctt
aaccgaactattacatctagtattagtcgagaaacgtctaagaaaagcagttttgatgcc
aagaaagaagagctagcaaggcagatacttttcagcttcatagtgaagtcagcgcagaat
tcttcagaccctccaaacactattccagctagcggtaagaagtacgatacatcaacctct
cctgccgaagcaattgcaaatgacagtgcaattataaagatattatatggaaacgagaga
aacaaagaatctgtccccgataacaataacaaccaaaggctacgaatgaagaatgtgaag
aacggcagtagagatagggaaggatttgttctcgtcacaaagcggagaagaaaccgccgg
cagttaacaaacgatgtaaatgacttgtacaatcatcagtcgatatgtgcatcggcacgt
tga
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