Primulina tabacum: 142556824
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Entry
142556824 CDS
T11246
Name
(RefSeq) paired amphipathic helix protein Sin3-like 3 isoform X1
KO
K11644
paired amphipathic helix protein Sin3a
Organism
ptab Primulina tabacum
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ptab03036
]
142556824
Chromosome and associated proteins [BR:
ptab03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
142556824
REST complex
142556824
Heterochromatin formation proteins
Other heterochromatin formation proteins
142556824
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
PAH_ZNF598
Motif
Other DBs
NCBI-GeneID:
142556824
NCBI-ProteinID:
XP_075524436
LinkDB
All DBs
Position
9:5136988..5149994
Genome browser
AA seq
1353 aa
AA seq
DB search
MKRARDDVFMNSQLKRPVISSRAQPPGQAQMVTTSSTQRLTTNDALTYLKAVKDIFQDNR
DKYDNFLDIMKDFKAQRVGTSGVILRVKELFKGHRHLILGFSAFLPVGYEITLPMEDELL
PKKKPVEFDEAINFVNRIKTRFQGDDHVYKAFLDILNMYRKDNKSITEVYQEVSVLFRGH
ADLLVEFTHFLPDTSGDASVHYTHSDRDCILPRDDRGSPMTIARANLVDKNVDHTDSDQW
NWVEKVERKEDGDQNEWEREDNFSHKRKSARKDDSATDQVYLGVQEPVSSFCEKVKERLK
DPINYDKFSDCVRSYKRKFITSSQFRILVASLLGSHPDLMEECEDFIIYVEKTGCLGNNK
TIVRSLKVEDRDAHDHDGEGMDKNKDHDIRESERYDRGIAFNPKDVSGHRMSLYASKDKL
MAKSIHELDLTDCESCTPSYRLLPQNYPISLASHRTEIGAKVLNDRWVSVTSGSEDYSFK
HMRKNQYEESLFRCEDDRFELDMLLESVNATTKHVEELLDSINVNTSMTDSSFRVEDHLT
ALNLRCIERLYGDHGLDVMDVLRKNALLSLPVILTRLKQKQEEWARCRSEFNKVWAEIYL
KNYHKSLDHRSFYFKQQDTKNLSAKVLLAEIKEMSEKYQNEGEMLLSIGAGYRQPKQPHM
EFEYSDPEIHEDLYRLMKYSCGEVFTVEQHTKIMTIWTSFLEPMLGVPARSHSPDSEDVK
RSNYVAKDVADIGVEVNGSPLGKAVSGNCKSVDLLKNGDKSIPTEQSSSSKEQMGNCGDG
FNIDGSPNADYSSYKSDFCIASKDAVMQTDCSIVFAASGASKQAGVFEQGASAESGINEE
HTSNRKNGPDVANSNYPIVAMLSEESQDDGSTRPTSSSTKMVHEEVKAQNCNEKTEGSTK
SEREEGELSPTRDPEQNNLAPFENICTEAAQTPFIRAGNTKGTELEICNKDAEETGANAD
DEDEMSTKGSSDGENLSENVDASESESADGVECSPEEPDENGEHNENDSKIESDGDVGGT
VNAPDTEGLTAFADRFSQNAKPLTMKIPVGLLGKAKNSEIFYGNDSFYSLFRLHQMLYER
MHSAKLHSLSPENKWRISSDANLTNSYARFKDSLHSLLNGSSDNAKFEDDCRAIIGAQSY
ILFTIDKLIHKLVKQLQTIATEEMENKLLHLCAYERSRDNEKISDAIYHENACFLIPEDN
LYRIECLASPRRLTIQLMKNENDKLEVTAVSMDPSFVTYLNDVLLSVPPERKEKSGVFLK
RNKKKCTTGDEIHDVQKSMEGLVIYNGLESKVVCNTLKAAYVLDTEDFLYRTGKRRKISN
QNGSCTDAVNGASNGVSNGYSHRVKRFRKLMFN
NT seq
4062 nt
NT seq
+upstream
nt +downstream
nt
atgaagagggctagagacgacgtgttcatgaattctcaacttaagcggcctgttatctct
tctcgggctcaaccgcccggtcaagcccagatggtaacaacaagcagcacacagaggctg
acaacaaatgatgcattgacgtatctgaaggctgtgaaggatatttttcaagacaatagg
gataaatacgataattttcttgacatcatgaaagatttcaaggctcaaagagttggtaca
tcgggtgttatattgagagtgaaggaattatttaaagggcaccgacacctaattttgggt
ttcagtgcttttctccccgtgggatatgaaatcactctccctatggaggatgaactactt
ccaaaaaagaagccagtagagtttgatgaagcaatcaactttgtaaacagaatcaagact
agatttcaaggtgacgatcatgtgtacaaagcttttcttgatattttgaatatgtacaga
aaagataataagtcaataaccgaggtttatcaagaggtttcagttctttttcggggccat
gctgacctacttgtagagttcacacactttctaccagatacttcaggtgatgcgtctgtc
cattatactcactctgatagagattgcatactaccacgggatgatagaggctctcccatg
accatagcaagggcaaatcttgttgacaagaatgttgatcacactgattcagatcagtgg
aattgggttgaaaaagtggaaagaaaagaagacggagaccaaaacgagtgggaacgtgag
gacaattttagtcataaacgaaaatctgctcgcaaagatgattctgcgacagaccaggtt
tacctaggggtgcaggagccagtgtcatcgttctgtgagaaagtgaaggaaagattaaag
gatccaattaattacgataaattttcagattgcgttcgttcctacaaaaggaagttcatc
acgtcatctcaatttcgtattctggtggctagtttactagggagtcatccagaccttatg
gaagaatgcgaagatttcataatttatgttgagaaaactggatgcttggggaacaataaa
actattgttagatctttaaaggtggaagatcgagatgcacatgatcatgatggagaaggc
atggataaaaacaaagatcatgatatcagagaaagtgagagatatgataggggtattgcc
tttaaccctaaagacgtttcaggacacaggatgtctttatatgcaagcaaagataagttg
atggctaaatccattcatgaacttgatctcaccgactgtgagagctgcaccccaagttat
cggcttcttccgcaaaattatccgatttcattagcaagtcatagaacagagattggtgct
aaagtgctgaatgatcgctgggtgtctgtcacatcaggaagtgaggattattcattcaaa
cacatgcggaaaaaccaatatgaggaaagtttgttccgttgcgaagatgataggtttgaa
cttgacatgttgttggaatctgtgaatgcaacaacaaagcatgttgaagaactcttagac
agtattaacgttaatacaagtatgacagacagttcatttcgcgtggaagatcatttgaca
gctcttaatctgcggtgcattgagcgtttatatggggatcatgggcttgatgtgatggat
gtattaaggaagaatgcattgctttccttgccagttatattaacccgattgaagcaaaaa
caagaagaatgggcaaggtgtcgctctgaatttaataaggtttgggctgaaatttatctg
aagaactaccacaagtcactagaccatcgaagcttctattttaagcagcaggatacaaag
aacttgagtgctaaagtattgttagccgagatcaaagaaatgagcgaaaagtaccagaat
gaaggtgaaatgcttctctcaattggtgctggatataggcaacctaaacaacctcatatg
gaatttgagtattccgatcctgaaatccatgaagatctttatcggctcatgaaatattca
tgtggggaagtttttacagttgaacagcataccaaaataatgacaatttggacatccttc
cttgagccgatgcttggtgttcctgcccgttcacacagtcctgactctgaagatgtcaag
cgtagcaattatgtagccaaagatgtggcagatattggtgtagaagtgaatggtagtcct
cttggtaaggcagtttcaggaaactgcaaatcagtggacctgttgaaaaatggtgataaa
agtattccgactgaacaatctagctccagcaaagagcagatgggaaattgtggtgatggg
tttaatattgatggttctcctaatgcagattattcctcttataagagtgacttctgtatt
gcatcaaaagatgcagtgatgcagactgattgcagtatagtttttgccgcatcaggtgca
agcaaacaagctggtgtctttgagcaaggtgcttctgccgaaagtggcatcaacgaggaa
catacttcaaataggaagaatggacctgatgttgccaattctaattatccaatagtggca
atgcttagcgaagaatcacaggatgatggtagtacaagacctacttcatcttcaactaag
atggtgcacgaagaagtcaaagctcagaactgtaatgaaaaaactgaaggtagcactaaa
agtgaacgagaagagggtgaattatctccgacaagagatcctgaacagaataatttagca
ccatttgaaaatatttgcaccgaagcagcacaaaccccttttataagggctggaaacaca
aaaggaactgaattagaaatatgtaacaaggatgctgaagaaactggggctaatgctgac
gatgaagatgaaatgagtactaagggctcatcagacggtgagaatctctctgaaaatgtt
gatgcttcagaaagtgagtcagctgatggagttgagtgttcccctgaagagcctgatgaa
aatggagaacataatgagaatgatagcaagattgaaagtgatggagatgtaggcggcaca
gtgaatgcccctgacactgaagggctgacggcatttgctgatcgtttttcacagaatgca
aaacctcttacaatgaaaatacccgtgggtttactgggaaaagcgaagaattcagaaatt
ttttatggaaatgattccttctattcgttgttcaggcttcaccagatgttgtatgaaaga
atgcatagcgccaagctgcactctttatctcctgaaaataaatggaggatttcaagtgat
gcgaatttaactaattcgtatgctagatttaaggattctctacacagtttactgaatggc
tcatctgataatgcaaagttcgaagatgactgccgtgctataattggtgctcaatcatac
atcctttttaccattgacaagctgatacataaacttgtcaagcagctacaaacgattgca
accgaggaaatggaaaacaaactcctccatctatgtgcatacgagagatccagagataat
gaaaaaatttcagatgcaatttatcatgagaacgcctgttttcttattcctgaagataac
ctgtatcgaatagaatgtttggcttctcctaggcgtctaaccatccagctcatgaaaaat
gagaatgataaacttgaagtgactgctgtctccatggatcccagttttgtcacatatctg
aatgatgtcctcttatcagttcctccagaaagaaaagaaaaatccggggtattcttgaag
agaaataaaaaaaaatgcacgactggagacgagattcatgacgtgcagaaatccatggaa
ggacttgtaatctataatggcctggaaagtaaggtggtttgcaatacattgaaggcggct
tatgttttagacacagaagacttcctctatcggacaggaaaaaggaggaagatttcaaat
cagaatggctcgtgcactgatgctgtcaatggagcttctaacggagtttccaatgggtat
tctcacagagtcaaacgttttcgcaagttgatgtttaattga
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