Paenibacillus taichungensis: ACJYJG_08710
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Entry
ACJYJG_08710 CDS
T11411
Name
(GenBank) RtcB family protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
ptac Paenibacillus taichungensis
Brite
KEGG Orthology (KO) [BR:
ptac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ptac03016
]
ACJYJG_08710
Enzymes [BR:
ptac01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
ACJYJG_08710
Transfer RNA biogenesis [BR:
ptac03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
ACJYJG_08710
Prokaryotic type
tRNA splicing ligases
ACJYJG_08710
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GFIT
Other DBs
NCBI-ProteinID:
XLM67123
LinkDB
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Position
1831665..1832885
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AA seq
406 aa
AA seq
DB search
MRIIDNIKVWGEPLENAVSQAVTCSQYGDVLGVALMADHHKGYSQPIGGVVAYRNMISPS
GVGYDIACGNKAVRTNLMWDDIRDQIAVIMDEINSTISFGVGRINPTPVEHELFDDASWR
LFDSIEPGLQHKLKTLARNQLGTVGSGNHFVDIFVEEATGKVWIANHFGSRGFGHKVASG
FLNLAAGRTFSGKAPGESMDQPPTLFDLKSEMGDMYWDGMTLAGRYAYAGRDYVIEQVLG
ILGASAEYSVHNHHNFAWKEQHMGEEVVVVRKGATPLAPGQLGFVGGSMGDISVIVEGIH
SEENTESFRSTVHGAGRIMSRTQAAGKMNYKRRIRMGGEISEEQMQAAIRAYGVELRGAG
TDESPFVYKKLQDVLNAHAHTLKINHILRPVGVAMAGGNEFDPYKD
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgcgtatcatagataacattaaagtctggggggagccgctagagaatgcggtaagtcag
gcggtgacttgctcgcagtatggagatgtactgggcgtggctctaatggcggaccatcac
aaaggatattcacagcctatcgggggcgtagttgcctaccggaacatgatcagtccgtca
ggagttggatatgatattgcctgtggaaacaaggctgtgcgcaccaacctgatgtgggat
gatatccgggatcagattgctgtcattatggatgagattaattcaaccatatccttcggc
gtagggcgtatcaatccaacacctgttgaacatgagttgttcgacgatgccagctggagg
ctgtttgattcgattgagcctggattacagcacaagttgaagacactcgcgcgcaaccag
ctcgggacagtaggcagtggcaatcactttgtcgacatttttgtggaagaggccacgggt
aaagtatggattgcaaaccactttggcagccgcggatttgggcataaggtcgccagtggt
tttctgaatctggctgccggacgtacatttagtggcaaagcgccgggagaatcgatggac
caaccaccaacactgtttgacctcaagagtgaaatgggtgatatgtattgggacgggatg
actttggcaggccgttatgcgtatgcagggcgcgattatgtgattgagcaggtgctcggc
attctaggggcgagcgcagagtattcggttcataaccatcataactttgcctggaaagaa
cagcatatgggcgaagaagtggtggtggtccgtaaaggagcaacgccgctggcaccggga
cagctcggttttgtgggcggaagcatgggagatatatcggtgattgtggaaggaatccac
agcgaagagaataccgagtctttccgcagtaccgtacatggtgcaggtcggattatgagc
cgaacccaagcggcaggcaaaatgaattataagcggcgtatacgcatgggtggcgagatc
agtgaggaacagatgcaagcggcgattcgtgcctatggtgtggagcttcggggtgcagga
acggatgaaagtccttttgtttacaagaaactgcaggatgtgctgaatgcgcatgctcat
accttgaaaataaaccatattctgcgtcccgtaggtgtcgcgatggccggaggtaatgaa
ttcgacccgtataaggactaa
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