Paenibacillus taichungensis: ACJYJG_09830
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Entry
ACJYJG_09830 CDS
T11411
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
ptac Paenibacillus taichungensis
Pathway
ptac03030
DNA replication
ptac03430
Mismatch repair
ptac03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ptac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ACJYJG_09830
03430 Mismatch repair
ACJYJG_09830
03440 Homologous recombination
ACJYJG_09830
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ptac03032
]
ACJYJG_09830
03400 DNA repair and recombination proteins [BR:
ptac03400
]
ACJYJG_09830
Enzymes [BR:
ptac01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ACJYJG_09830
DNA replication proteins [BR:
ptac03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ACJYJG_09830
DNA repair and recombination proteins [BR:
ptac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ACJYJG_09830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
DUF8098
Herpeto_peptide
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
XLM67333
LinkDB
All DBs
Position
2080608..2084702
Genome browser
AA seq
1364 aa
AA seq
DB search
MSSFVHLHVHSEYSLLDGAARIPDLVNKAADLGMTTLALTDHGVMYGAIPFYKACVERGI
KPIIGCEAYMTAGSRKERGSRKDQPIHHLILLAKNMTGYRNLMKLCSIGHLEGFHYKPRI
DMESLAAHHEGIICLSACLGGEVPQHLLHGREEEAKRAALRYKNIFGADFYLELQDHGLS
EQKRVNPQLIRLAAELDIPLVATNDAHYLSEEDAELQDVLICIGTGKTVDDENRLRIGTN
QLYLKNEQEMARLFPHVPEALANTVRIAESCELQLEFGKSILPEYRPLPEGKTPSAYLRQ
LCEEGMEERYNESSRWTDTELRAELEQRLEYELRVIDSMGFSDYFLIVWDFIAYSHQQGI
VTGPGRGSSAGSLVAYTLRITDVDPMKYNLLFERFLNPERISMPDIDIDFSDERRDEVIE
YVAKKYGKAHVAQIITFGTMAARAAVRDVGRALNVPYGEVDKAAKLIPAQLGINIQRAME
ATPELKALYETKPKTRELLDMAMKVEGMPRHASTHAAGVVISRDPLTDAVPLQEGSEGTA
LTQYSMENLESIGLLKMDFLGLRTLSIIERCLRWIGENGEIPDFRHIPDDDALTYEMLGR
GDTMGIFQLESAGVRRVLKELKPSVFEDIISVLALYRPGPMEFISKYIQGKHGQIEVDYP
HADLESILKDTYGIIVYQEQIMQIASRMAGFSLGEADLLRRAVSKKKREVLDLERGHFVQ
GSLKQGYSEAEADLVYDMIVKFANYGFPRAHAAAYGVLAFQTAYLKAHYPIHFMASMLTA
VMGSHRKVAEYVVECRRMDIEVLPPDVNESGILFTPVLTSSSKTSADQAAETQRLEGEQG
ENGTASPTMAHAVHDDYYSGQAEYGEAPLPDDPGPAPDEDGSSYEWQAATTVPEHTEDRI
NSGVVTVSTAERLHGTGKEGALHSEQHEMSAVQEKDGLSVQNSDADTATGAIRFGLAAVK
NVGTQAMESIMIVRQERPFDSLLDFCRRVDLRVCNKRVIESLIQAGAFDTLPGHRAQLLA
MLDETVEAALKWRKEREDLQIQLFDFVETPNWEIEYPEIPPYSGSQQLELERELLGLYLS
GHPLDDYEDVLESSGADRIMELTEAADDTMAVAAGMVVSVKSITTKQGKAMAFMELEDQI
ERCEVVLFPEVWRRSQQHVGKGELLVVRAKVQQQDEGFKLLAEEVAPLSPAALEQQLRSR
ERRGKPGSGSASRPTASPRQAAGAGAGAQRSSSGVSAGAARSSGSQGPAATHSAAGGPGA
ANASEAASVARRAAEAAGGTEQSRGPRAVEQRVFVKITPQAENPELLARLKQLLQRHSGP
VATVLFYEQHQKLLALSDAYRIKPSPSLFSEMEKMLGDGTVKIK
NT seq
4095 nt
NT seq
+upstream
nt +downstream
nt
atgagttcttttgtgcatttgcacgttcatagtgaatatagtttgctggacggcgctgcg
cgtataccggatctcgtgaataaggccgcggatctcggaatgactacgctggcattgacc
gaccacggtgtaatgtatggtgctatccctttctacaaagcatgcgtcgagcggggaatt
aagccgatcattggatgtgaggcttatatgactgccgggtctcgcaaagagcggggaagc
cggaaggatcagccgatccatcatctgattttactggccaaaaatatgacgggttatcgc
aatctgatgaaactatgctccatcggacatttggaaggcttccattacaaaccgcgtatt
gatatggagagtctggctgctcatcacgagggtattatctgtttaagtgcttgtctgggg
ggcgaggttccccagcatttgctgcatggacgcgaggaagaggcgaagcgtgcggcgctg
cgttacaaaaacatttttggtgccgatttctatctggagctgcaggaccacgggctatct
gagcaaaaaagagtgaatccccaactgattcgtctggcagcagagctggatattccattg
gtggcgaccaacgatgcgcactatctgtccgaagaggacgcggagcttcaggatgtgttg
atctgcatcggaacagggaaaacggtagatgacgagaaccggctgcgtatcggaaccaat
cagctttatctcaagaatgaacaagaaatggcgcgtttgttcccccatgtgcccgaagca
ttggcgaatacggttcgcatcgcggaatcgtgtgagttgcagctggaattcggcaaatcc
attttgccggagtacagaccgcttcctgaagggaaaactccgtctgcctatctgcgtcag
ttgtgcgaagagggaatggaagagcgctataatgaatcatcgcgttggacggacacggag
ctcagagccgagcttgaacagcggctggaatatgaactccgggttatagacagtatggga
ttctcggattatttcctgatcgtatgggattttatcgcctattctcaccagcagggaatt
gtcaccggaccgggtcgtggctcctcggcaggtagtcttgttgcctataccttgcgtatt
acagacgttgatcccatgaagtataacctgctcttcgagcggtttttgaatccggaacgg
atctccatgccggatattgatatcgacttcagcgatgaacggcgagacgaagtcattgaa
tatgttgcgaaaaaatacggcaaagcccatgtagcccaaatcattacctttggtacgatg
gctgcccgtgcagccgttcgggacgtcggacgtgcattgaatgtgccttacggcgaggtg
gacaaggcagcgaagctgattcctgcacagcttggcattaacattcagcgggcaatggaa
gccacccctgaactgaaggctctgtatgagaccaagcccaaaacacgtgagctgctcgat
atggcgatgaaagtggaaggcatgcctcgtcatgcttccacgcatgcggcgggggttgtc
atctcccgtgatccgcttacggatgccgttccgcttcaagaggggagtgaggggacggcc
ttaacgcaatattccatggaaaacctggagtctatcggactgctcaaaatggacttcctc
ggtctgcgtaccctttcgattattgaacgctgtctgcgctggattggggaaaatggcgaa
attccggattttcgtcatattccggacgacgatgcactcacgtatgagatgcttggccga
ggcgacacgatggggatattccagcttgaatccgcaggggtgcgtcgtgtcctgaaggag
ctgaagccgagtgtatttgaagatattatttccgtgttggccctgtatcgtccgggccca
atggagttcatatccaaatacattcagggcaaacatggccagatcgaagtggattacccc
catgcggatctcgagtccatccttaaggatacgtacggcatcattgtctatcaggaacaa
attatgcagattgcttcccggatggcaggcttctctctcggcgaagcggatttgctccgc
agagcggtatccaagaaaaaacgggaagtactggatctcgaacgtgggcatttcgttcag
ggcagtctgaagcaagggtacagcgaagcggaggcagacctggtctatgatatgatcgtc
aagttcgccaactacggtttcccgcgtgcccatgccgctgcgtatggcgtgcttgctttc
cagacggcttatctgaaagcacattatcccattcattttatggcatccatgttaactgcc
gtgatgggcagtcaccgcaaggtagcggagtatgtcgtggaatgccgacgtatggacatt
gaagtacttccaccggatgtgaatgagagcggtattctgtttacacctgtacttacatca
tctagcaaaactagtgctgaccaagcagcggaaacccaacgtttagagggagagcagggt
gagaatgggacagcaagtccaacgatggcacatgctgtacatgatgattattattccgga
caagcagagtacggcgaagcgcctctgccagatgacccgggccccgcaccagacgaagat
ggtagttcatacgagtggcaggcagcgacgactgtgccggagcataccgaggatcggatt
aattcgggcgtagtgactgtttctacagcagaacgccttcatggaactgggaaagagggg
gccttgcattccgaacagcatgaaatgtctgctgtacaggaaaaggatggattgtcggtt
cagaactctgatgcagatacagcaaccggggcgatacgatttggtctggctgcggtaaaa
aatgtaggtacccaggcaatggagagcatcatgattgtacgtcaggaaagaccgttcgac
agcctgctcgatttttgtcgtcgcgtcgatttgcgggtatgcaacaaacgtgtgattgaa
tcgcttattcaggcgggagcctttgacacattgcctgggcaccgcgcccaattactggcg
atgctggatgaaacggtggaagccgctctgaaatggcgcaaggaacgcgaggatctacaa
attcaattgtttgattttgtcgagaccccgaactgggagattgaatatcccgaaattccg
ccttattccgggagtcagcagttggagctggaacgtgaactgttaggtttgtatctgtct
ggtcatccactggatgactacgaagatgtgcttgaatccagcggcgcagatcgcattatg
gagctgactgaagcggctgacgatacgatggccgtcgcagctgggatggttgtgtctgtg
aagtcgattacgacgaaacagggcaaggctatggcgttcatggagctggaagaccagatc
gaacgctgtgaagtggttctctttcccgaagtatggcggcgaagccagcaacatgttggg
aaaggtgaactgctcgtcgtgcgtgccaaggtgcagcagcaggacgaagggttcaagctg
ctggctgaggaagtggcgccgttgtcaccggcggcactggaacagcagctgcgcagccgc
gaacggcgcggtaagcccggcagcggcagtgcttcgcgcccgacggcttcgccacggcag
gcggctggcgcgggagccggagcacagcgcagcagctcaggcgtgagtgctggagctgca
cgcagcagcggaagccagggcccggcagcgacgcacagcgctgcgggtggaccaggtgcg
gccaatgccagtgaggccgcttccgtggctcgacgtgccgctgaggccgctggcggcacg
gagcagagccgtgggccgcgagcagtggagcagcgagtgttcgtgaagatcaccccgcag
gcggagaatccagagcttctggcccgactaaaacaattgcttcagcggcattcgggtccg
gtggcgacggtgctcttctatgaacagcatcagaagctacttgcattgagtgatgcctac
cggattaaaccttcgccctctttattctccgagatggagaagatgctgggtgatggcaca
gtcaaaataaaataa
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