Paenibacillus taichungensis: ACJYJG_11870
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Entry
ACJYJG_11870 CDS
T11411
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
ptac Paenibacillus taichungensis
Pathway
ptac03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ptac00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACJYJG_11870 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptac03019
]
ACJYJG_11870 (pnp)
03016 Transfer RNA biogenesis [BR:
ptac03016
]
ACJYJG_11870 (pnp)
Enzymes [BR:
ptac01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
ACJYJG_11870 (pnp)
Messenger RNA biogenesis [BR:
ptac03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ACJYJG_11870 (pnp)
Transfer RNA biogenesis [BR:
ptac03016
]
Prokaryotic type
tRNA degradation factors
ACJYJG_11870 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH-I_KHDC4-BBP
SPATA25
OB_RRP5_4th
S1_RRP5
Motif
Other DBs
NCBI-ProteinID:
XLM67716
LinkDB
All DBs
Position
2533837..2535939
Genome browser
AA seq
700 aa
AA seq
DB search
MEQRVEMQLGGRTLTLETGRLAKQANAAVKVTYGDTVVLCTVTASSEPKDLDFFPLTVNY
EERLYAVGKIPGGFIKREGRPSEKAILSSRLTDRPIRPLFPEGFRNDVQVLNIVMSVDQD
CEPQIAAMIGTSAALSISDVPFSGPIGGVKVGRINGEFIINPTIAQLEVSEIELVVAGTK
DAIMMVEAEANEVPEEVMLEAIMFGHDEIKNIVAVIEQLVQVAGKEKMAVKLHAVNAEVN
SSVREFASARLVEAVKIAEKHARQDAIDVVNDETVAHFEEKYIESPELLKDVKEVLHDIV
KEEVRRLITHDKVRPDGRGLAEIRPIECDTSLLPRTHGSGLFTRGQTQALSICTLGALGD
VQILDGISLEETKRFMHHYNFPPFSVGEARPLRAPGRREIGHGALGERALSKVIPSETDF
PYTIRLVSEVLESNGSTSQASICASTLAMMDAGVPIKAPVAGVAMGLIKDGDHVSILSDI
QGMEDHLGDMDFKVAGTPDGVTAIQMDIKIDGIDRQILSEALAQAKEGRMHILSKMTEVM
KTPREQLSQYAPKITTMHINPDKIRDVIGAGGKIINKIIEETGVKIDIEQDGRVFIASSN
QEMNDKAKSIIEGIVREVLVGEIYVGKVKRVEKFGAFVEVLPNKEGLVHISQLSTERVAK
VEDVVAIGDSITVKVTEIDPQGRINLSRKAVLTAEAPAQS
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atggaacagcgtgttgaaatgcagcttggtggaagaacgcttacgcttgaaacagggcgt
ttggccaagcaggctaatgctgccgttaaggtaacgtacggggataccgttgtattgtgt
accgtgacagcatcaagtgagcctaaagatctggattttttcccattgacggtaaactat
gaagaaagattgtatgccgtaggtaaaatcccaggtggatttattaaacgtgaaggcaga
ccaagtgagaaagcaattctttcgagccgtttgacagaccgtccgattcgtcctttgttc
ccggaaggtttccggaatgatgtacaagttctgaatatcgttatgagtgtggaccaggac
tgcgaaccgcaaattgctgccatgatcggtacttcggctgcactgagcatttcggatgtt
ccatttagcggaccaattggtggcgtaaaagttggacgtattaatggtgaattcatcatc
aacccaacgattgcacagctagaggtaagtgagattgaactcgttgttgcaggaaccaaa
gatgccatcatgatggttgaagcggaagcgaacgaagttccggaagaagtaatgttggaa
gcaatcatgttcggacatgacgagatcaagaacattgttgcagtcatcgaacaactcgta
caagtggctggtaaagaaaaaatggctgtgaaattgcatgccgttaatgctgaagttaac
agcagtgtacgtgagtttgccagtgcgcgtctggttgaggctgttaaaattgctgagaaa
catgcgcgtcaggatgcaatcgatgtcgtgaatgacgaaactgttgctcacttcgaagag
aagtatattgagtctcctgaactgcttaaagatgtgaaagaagtgctgcacgatatcgtc
aaagaagaagtgcgccgcctgattacacatgataaagttcgtccggatggacgtggactt
gctgagattcgtccaattgaatgtgatacttccctgctgccacgtactcacggttcaggt
ctgttcactcgtggtcaaacgcaagcgctcagcatttgtacacttggtgcactgggtgat
gttcagattttggacggaatcagtcttgaagaaacgaaacgtttcatgcatcactacaac
ttcccgccgttcagcgtaggtgaagctcgtccattgcgtgctccgggccgtcgcgaaatc
ggacatggtgctctgggtgagcgtgctctttccaaagtaattccttccgaaacggacttc
ccatacacgattcgtctcgtatccgaagtattggaatccaacggttcaacttcccaggca
agtatctgtgccagcacattggctatgatggatgcaggtgtaccaatcaaagctccagtt
gcgggtgtagctatgggtctgattaaagacggagatcacgtatccatccttagtgatatt
caaggtatggaagatcacctcggtgacatggacttcaaagtagcaggaacacctgatggt
gtaacagcaattcagatggatatcaaaattgatggtattgatcgtcaaattttgtccgaa
gcattggctcaagccaaagaaggtcgtatgcacatcttgagcaaaatgaccgaagtgatg
aaaacgccacgtgagcagttgtcacaatatgcccctaaaattacaaccatgcatatcaat
ccggacaaaatccgtgatgttatcggtgcaggtggtaaaattatcaataaaatcatcgag
gaaaccggtgttaaaattgatattgaacaggatggacgtgtctttattgcctcttctaac
caagagatgaatgataaagccaaatcgatcatcgaaggcattgtacgtgaagtactggtc
ggcgaaatttatgtaggtaaagtaaaacgtgttgaaaagtttggtgcattcgttgaagtg
ctgccgaacaaagaaggtctggtccacatctcacaattgtccacagagcgtgttgctaaa
gtggaagatgttgttgccattggtgattccattacagtaaaagtaacggaaattgaccca
caaggccgtatcaacttgtcccgcaaagccgtattgactgctgaagctccagctcaatca
tag
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