Paenibacillus taichungensis: ACJYJG_24420
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Entry
ACJYJG_24420 CDS
T11411
Name
(GenBank) RtcB family protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
ptac Paenibacillus taichungensis
Brite
KEGG Orthology (KO) [BR:
ptac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ptac03016
]
ACJYJG_24420
Enzymes [BR:
ptac01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
ACJYJG_24420
Transfer RNA biogenesis [BR:
ptac03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
ACJYJG_24420
Prokaryotic type
tRNA splicing ligases
ACJYJG_24420
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Ortholog
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GFIT
Other DBs
NCBI-ProteinID:
XLM64325
LinkDB
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Position
complement(5422897..5424360)
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AA seq
487 aa
AA seq
DB search
MNTQPNLFTSQNEPIGGYRHEVKLPAGDLTVYAAQQLFSSLDYKVFEMANNNLQIPGISY
MSYTPDVHVGVGTCIGTTAVWDASSGYVSPSIVGSDIGCGMRVHMTNLHKDDLKDVKLRR
KLVKAIEKVLPMEANQRGHYSDIRLEHIVRKGLHGLPKKYIPDSYTPKKSTSITHVESSK
FAFDEDVLNLVPDMTWHRAHRQLGTLGGGNHFAEIQAIEIAEENREIAEAWGLYDGQIVV
MIHSGSRAWGGYVSQTSSSAIAKVMQRNGLGTSDPRLVFAPLEHAEGRHYVNMMYSALNY
AVVNRHLIAYAIREAFRDVFGPKCEFRTLYDLMHNYAWEESHADQGSVFVHRKGATRALP
AGHPDNPKPYLATGHPALIPGSMGTASYIMVGQPEGKDNYYSICHGAGRIRSRTATKRLV
TVEDFASALGVGTEDEIVVNQRSLESIIDESPQAYKNVDEIIDSVTGAGLAQVVAKCKPL
AAVKGAK
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgaatacacaacctaatttatttacgagtcaaaacgaacccataggtggctaccgacat
gaagtcaaattgccagctggggacttaacggtatatgcggcacaacaactattctcgtca
ttggactataaggtgttcgagatggcgaacaacaatcttcaaatcccgggtatttcctat
atgagctatacgcctgatgttcatgtcggtgtaggcacctgcatcggcacaacggcggta
tgggatgccagtagtggttatgtatctccatccatcgtaggcagtgatatcggctgtggt
atgcgagtgcatatgaccaatttgcataaagacgacctgaaagacgtgaagctgcgccgt
aaacttgttaaggccattgagaaagtgctgccgatggaggcaaatcaacgcggtcattac
tcggacattcgtttggagcatattgtgagaaagggtctgcatggattacctaaaaaatat
atcccggatagctatacaccgaaaaaatcaacttccatcactcatgtagagagcagcaaa
tttgcttttgatgaggatgtgttaaatctggtcccggatatgacttggcatcgggctcat
cgccagttaggaactttgggtggaggcaatcattttgccgagattcaagcgattgagatt
gccgaggaaaatcgggagattgcggaagcatggggtctgtacgatggacaaattgttgtc
atgattcattccggttcccgggcatggggcgggtatgtaagccaaaccagttcatcagca
attgcgaaagtgatgcagcgaaatggtttggggacatccgatccaagactggtgtttgct
ccgcttgaacatgccgaaggtcgccattacgtcaatatgatgtattctgctttgaattat
gccgtggtgaatcgccatctgattgcttatgcaattcgcgaagcttttcgggatgtgttt
ggtccaaaatgcgaattccgtaccctctatgatctgatgcacaactatgcatgggaggaa
tcgcacgcggatcaaggatctgtctttgtacaccgcaaaggagctacacgtgcattacct
gccggtcacccggataacccgaagccatatctggcaacaggccatcccgcgcttattccc
ggttcaatggggactgcttcatatattatggtaggtcaacccgaggggaaggataactat
tattcgatctgtcatggggcaggacgcattcggtcgcgcacagcaacgaagcgcctggtt
accgtggaggattttgcctcggccttgggtgtgggaactgaagatgagattgtggtgaac
cagcgttcgcttgaatcgattatcgatgaatcaccgcaagcgtataaaaatgttgatgaa
attatagatagtgttaccggcgcaggtctggctcaagttgtagccaaatgtaaaccactt
gccgctgtgaagggagccaagtaa
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