Paenibacillus taichungensis: ACJYJG_27790
Help
Entry
ACJYJG_27790 CDS
T11411
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
ptac Paenibacillus taichungensis
Pathway
ptac03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ptac00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ACJYJG_27790 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ptac03021
]
ACJYJG_27790 (rpoC)
03400 DNA repair and recombination proteins [BR:
ptac03400
]
ACJYJG_27790 (rpoC)
Enzymes [BR:
ptac01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ACJYJG_27790 (rpoC)
Transcription machinery [BR:
ptac03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ACJYJG_27790 (rpoC)
DNA repair and recombination proteins [BR:
ptac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ACJYJG_27790 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
XLM64918
LinkDB
All DBs
Position
complement(6136135..6139749)
Genome browser
AA seq
1204 aa
AA seq
DB search
MLDVNNFEYMKIGLASPEKIRSWSRGEVKKPETINYRTLKPEKEGLFCEKIFGPTKDWEC
HCGKYKRVRYKGVVCDRCGVEVTRAKVRRERMGHIELAAPVSHIWYFKGIPSRMGLALDM
SPRSLEEIIYFASYVVTDPGETPLEKKQLLSEKEYRSYREKYGYGFQAGMGAEAVKKLLQ
DLDVDKELEFLKEELRTAQGQRRNRAIKRLEVIEAFRNSGNKPEWMIMDVLPVIPPELRP
MVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDLGAPDIIVQNEKRMLQEAVDALIDNGR
RGRPVTGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPYLKMYQCGLPKD
MALELFKPFVMKELVNKGLAHNIKSAKRKVERVSPEVWDVLEEVIKEHPVLLNRAPTLHR
LGIQAFEPILVEGKAIRLHPLVCTAYNADFDGDQMAVHVPLSAEAQAEARILMLASGNIL
NPKDGKPVVTPSQDMVLGSYYLTMDNKEEKGTGMILRTVNEAVSAYQRGTAGLHARVAIP
VRALGKTSFTDEQQDAMLLTTVGKIIFNEIFPASFPYINDATRANLYQGTAEHSFVYEKG
ADLREAIMNAPLAGGVGKEYLGSIIARCFEIYHTTETAVILDKIKQLGFTYSTRAGITVA
VSDVIVPEEKTEILRQSEEKAQIVTNQYRRGLITNEERYDRIIDIWSKSKDDITEILMKS
MDRYNSIMMMVDSKARGNKSQITQLGGMRGLMANPSGRIIELPIKSNFREGLTVLEYFIS
THGARKGLADTALRTADSGYLTRRLVDVAQDVIVREDDCGTDKGFTVSRIQDGKEVIEDL
YDRIEGRYCFETVRHPETKEVIAHRNELIDSDKAEAIIKAGVTKLQIRSVLSCRARHGVC
KKCYGRNLATGKHVEIGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDITQGLPRIQEL
FEARNPKGQATISEIDGVVKEIREAKDRREIEIQGEAESKVYSVTYGSRVRVSEGMEIEA
GDELTDGSIDPKEMLRIKGVRGVQNYILQEVQRVYRNQGVEINDKHVEVMIRQMLRKIRI
VDAGDTTLLPGSFVDTHEYERANKTAILSDKEPAVAKPILLGITKASLETDSFLSAASFQ
ETTRVLTDAAIKGKVDQLLGLKENVIIGKLIPAGTGMNRYRSIKFAEPEDGQSSVEELEP
VSVD
NT seq
3615 nt
NT seq
+upstream
nt +downstream
nt
ttgttggacgtcaacaatttcgaatacatgaagatcgggcttgcttccccagaaaaaatt
cgttcttggtcccgcggagaagtgaaaaaaccggaaacgatcaactatcgtacgttgaaa
ccggaaaaagaagggctgttctgcgaaaagatttttggccctacaaaagactgggaatgt
cattgcggtaaatacaaacgcgtccgttataaaggcgttgtctgtgatcgttgtggcgtt
gaagtgacacgtgcgaaagtacgccgcgaacggatgggccatattgagctcgctgctccg
gtatcgcatatctggtacttcaaaggtattccgagccgcatgggtctcgctttggatatg
tctccaagatctctcgaggagattatttattttgcatcatatgtagtaactgatccagga
gaaactccactggagaaaaaacagctgttgtccgagaaagaataccgcagctaccgtgag
aaatacggatatggattccaggctggtatgggtgcagaagcggttaaaaaactgcttcaa
gaccttgatgtggataaagagcttgaattcctgaaggaagagctccgcactgcacaagga
caacgtcgtaaccgtgcgattaaacgtttggaagttatcgaagcattccgcaactcaggt
aataaacctgagtggatgatcatggatgtacttcctgttatcccgccggaacttcgtcca
atggtacagctggatggtggacgttttgcaacgtctgacctgaatgacctgtatcgccgt
gtaatcaaccggaacaaccgtctgaaacgtttgcttgaccttggcgcgccagacattatc
gtgcaaaatgaaaaacggatgctgcaggaagctgttgacgcattgatcgacaacggccgt
cgtggacgccctgtaacgggtcctggtaaccgtcctttgaaatccctcagccacatgctg
aaaggtaaacaaggacgtttccgtcagaacttgctcggtaaacgggttgactattccggt
cgttccgttatcgtagttggaccttatctgaaaatgtatcagtgtggtctgcctaaagat
atggcacttgaattgttcaagcctttcgttatgaaagagcttgtaaataaagggcttgcc
cacaacatcaagagcgctaaacgtaaagttgagcgtgtaagtcctgaagtatgggatgtt
cttgaagaagtaattaaggagcacccggttctgttgaaccgtgcccctacacttcacaga
ctcggtattcaagcatttgaaccgattctcgttgaaggtaaagccatccgtcttcacccg
ctcgtatgtacggcttacaatgccgactttgacggtgaccaaatggccgtgcacgttcca
ttgtctgctgaagctcaagcagaagcacgtatcctgatgctggcatcaggtaacattttg
aacccgaaagacggtaaaccggttgttaccccttcccaggatatggtgcttggttcttac
tacctgaccatggacaacaaggaagaaaaaggaacaggtatgattttgcgcacggtaaac
gaagctgtatccgcgtaccaacgtggaactgctggtttgcatgcacgtgtagcgatcccg
gttagagcgcttggcaaaacaagctttaccgatgaacaacaagatgcaatgttgctgact
actgtcggcaaaatcatctttaacgaaatcttcccggcaagcttcccttacatcaatgat
gcaactcgtgcgaacctttaccagggtacagctgagcattcatttgtttatgagaagggt
gctgaccttagagaagcgattatgaacgctcctttggctggtggtgtcggtaaagaatat
ctcggttcgatcatcgcacgttgttttgaaatttatcatacaacggaaacagccgttatt
ttggataaaatcaaacaactcggattcacatactccactcgcgccggtattacggttgcg
gtatcggatgttatcgttccggaagagaaaaccgaaattcttagacagtcggaagaaaaa
gcacaaatcgttacgaatcagtaccgtcgtggtctgattacgaacgaagagcgctatgac
cgcatcattgatatctggtcgaaatcgaaagatgatatcaccgagattctgatgaaatcg
atggatcgttataactccatcatgatgatggttgactccaaagcacggggtaacaaatcg
caaatcacccaattgggcggtatgcgtggtctgatggccaacccatccggtcgaatcatt
gaactcccaatcaaatcgaacttccgtgaaggtctgacggtactcgagtacttcatctcg
actcacggtgcccgtaaaggtttggccgatacggccctgcgtacagcggattcaggttac
ctgactcgtcgtctcgtagacgtggcacaagacgtgatcgtgcgtgaagatgattgtggt
acagataaaggctttacggtaagtcgtatccaagatggtaaagaggttattgaggatctt
tacgaccgtattgaaggcagatactgcttcgaaactgttcgtcatccggaaacaaaagaa
gttattgcacaccgcaatgagctgattgattccgataaagcagaggcaatcatcaaagct
ggcgtaaccaaattgcaaatccgttccgtactcagctgccgtgctcgtcacggtgtctgc
aagaaatgttatggtcgtaacttggcgactggtaaacacgtggaaatcggtgaagcagtt
ggtattatcgcagcacaatccattggtgagccaggaacacagttgacaatgcgtacgttc
cacaccggtggtgtagccggagacgatattacgcaaggtttgccgcgtatccaggagttg
tttgaggctcgtaatcctaagggtcaagcaacaatcagtgagattgatggtgttgtcaaa
gagattcgcgaagcgaaagatcgtcgtgaaatcgaaattcaaggtgaagcagaatccaaa
gtttactctgttacctacggttcccgtgtacgcgtaagcgaaggcatggaaattgaagca
ggcgacgagttgacagacggttctatcgatccaaaagaaatgctgcgcattaaaggcgta
cgtggcgtacagaactacattttgcaggaagtacagcgcgtataccgtaaccaaggcgta
gaaatcaatgacaaacacgttgaagttatgatccgtcaaatgttgcgtaaaatccgtatc
gtcgatgcaggggacactacgttgttgccaggatcgttcgtggatacgcatgagtacgaa
agagctaacaaaacagcgattctgagtgataaagagccagcggttgcgaaaccaatcctg
ctcggtattacgaaagcatccctggaaacagactccttcctctcagcggcatcgttccaa
gaaactacacgtgtcctgacagatgcagcgatcaaaggtaaagtcgatcagttgctcggt
ctgaaggaaaatgtaatcatcggtaaattgattcctgcaggtacaggcatgaaccgttac
cgcagcatcaaatttgctgagccagaagatggccaatcttcagtagaagaacttgagcca
gtttcggttgattaa
DBGET
integrated database retrieval system
