Paenibacillus taichungensis: ACJYJG_28025
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Entry
ACJYJG_28025 CDS
T11411
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
ptac Paenibacillus taichungensis
Pathway
ptac03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ptac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ACJYJG_28025 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptac03400
]
ACJYJG_28025 (uvrA)
DNA repair and recombination proteins [BR:
ptac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ACJYJG_28025 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ACJYJG_28025 (uvrA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_21
AAA_29
AAA_16
RsgA_GTPase
nSTAND1
AAA_22
nSTAND3
AAA_25
DnaJ_CXXCXGXG
AAA_33
nSTAND6
NACHT
cobW
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
XLM64959
LinkDB
All DBs
Position
complement(6196872..6199730)
Genome browser
AA seq
952 aa
AA seq
DB search
MASENIVIKGARAHNLKNIDITIPRDRFVVLTGLSGSGKSSLAFDTIYAEGQRRYVESLS
AYARQFLGQMEKPDVDSIEGLSPAISIDQKTTSRNPRSTVGTVTEIYDYLRLLFARVGHP
HCPDHGVEISSQTVEQMVDRIMQYPERTRLQILAPIVSGRKGEHKSVFSDISKQGFVRVR
VNGELRDLSEDIQLEKNKKHTIEVVVDRIVIKEDVQSRLADSIETALNLSGGQLLVDIMG
EEELRFSSNFACPVCGFSIEELAPRMFSFNSPFGACPDCDGLGVKMIVDPDLLVPDRSKT
IEDGAFDAWTGGTSTYYPQFLKSVCEHFNIPQNVPVEDLPAEQMNKLLQGTGTEKIRFRY
ENDFGQRKEALVTFEGIVNNLERRYRETASEGIREFIEGYMSAKPCGTCKGQRLKRESLA
VTINDHNMAYVTSLSIGEAGRFFDSLQLSEKEEMISKLILKEINSRLGFLVNVGLDYLTL
SRAAGTLSGGEAQRIRLATQIGSSLMGVLYILDEPSIGLHQRDNDRLISTLAHMRDIGNT
LIVVEHDEDTMMAADYIIDIGPGAGIHGGTIMSQGTPEEIMNDENSLTGQYLSGRKFIPV
RTERRSVGDRWLEVRGAKENNLKNLNVKIPVGVFTAVTGVSGSGKSTLINEILYKTLARD
LNRARVRPGQHKEIRGLEHIDKVIDIDQSPIGRTPRSNPATYTGVFDDIRDLFAQTNEAK
VRGYKKGRFSFNIKGGRCEACRGDGIIKIEMHFLPDVYVPCEVCKGKRYNRETLEVKYKN
RNIADVLEMTVEDATQFFENIPKIHRKMQTLLDVGLGYINLGQPATTLSGGEAQRVKLAS
ELYRRSTGKTIYILDEPTTGLHVDDIDRLLNVLHRLVDSGESVLVIEHNLDVIKTADYIV
DLGPEGGSGGGTIVATGTPEDIIKVEASYTGKYLKPVLERDTERSKTLQLTE
NT seq
2859 nt
NT seq
+upstream
nt +downstream
nt
ttggcgagcgagaacattgtcatcaaaggcgcgcgagcgcataacctcaaaaacattgat
atcaccatcccgcgtgaccgttttgttgtattgaccggtctaagtggctcaggcaagtcc
tcgctggcttttgacacgatatatgccgaaggacagcgacgttacgtggaatcattatcg
gcttatgcacggcagttcctggggcagatggagaaaccggacgttgattccattgaaggc
ttgtctccggccatctccatagatcagaaaacgacaagtcgtaacccgcgttctacagtc
ggaaccgttacggaaatctatgactacctgcgtctgttatttgcacgtgtgggacatcct
cattgtccggatcatggcgtggaaattagctcccagaccgttgaacaaatggttgaccgc
ataatgcaatatcctgagcggactcggttgcagattctggcaccgattgtctcgggacgc
aagggtgaacacaaaagtgtgttttccgatatctccaaacaaggttttgtccgtgttcgg
gtgaacggggaattacgtgatctgtccgaagatatccaattggagaagaacaagaaacat
acgattgaagtcgtcgttgaccggatcgtgatcaaggaagatgtgcaatcgcgtttggcc
gattctattgagactgcacttaatctgtccggtggacaactgctggtagatattatgggt
gaagaagagctgcgtttcagttccaactttgcctgcccggtgtgcggattcagtattgaa
gagctggcgccgcgcatgttttcattcaacagcccatttggagcctgcccggattgtgat
ggattaggtgttaaaatgattgttgatccggatctattggtgccggatcgcagcaaaaca
attgaagacggtgcgtttgatgcgtggacaggtggcacatcgacctattatccgcagttc
ctcaagtcggtatgcgaacactttaatattccgcaaaacgtacctgtagaggatctgcct
gctgaacaaatgaacaagctgttgcagggtacaggtacagagaaaattcgtttccggtac
gagaatgattttggacaacggaaagaagcactggttacctttgaaggtattgtgaataat
ctggagcgtcgttaccgtgagacggcatccgaaggtatccgtgaattcattgaaggttat
atgagtgccaagccgtgtggaacatgtaaaggacagcgactgaaacgtgaaagccttgct
gttacgattaacgatcataacatggcgtatgtgacaagtttgtccattggagaagctggt
cgtttcttcgattcgctgcaattgagtgagaaagaagaaatgatttccaaacttattttg
aaagaaatcaacagccgtctaggcttcctggtgaacgtaggtctggattatctgaccctt
agccgtgctgcaggaacgttatccggtggtgaagcccagcggatcagactggcgacacag
attggttccagccttatgggcgtgctgtatattctggatgagccgagtatcggcctgcat
caacgggataatgatcgtctgatctccacactcgctcacatgcgggatatcggtaacaca
ctgatcgtggttgaacatgatgaagatacgatgatggccgccgattatattattgatatt
ggtccgggggcaggtatccacggcggtaccatcatgtcacagggtacaccggaagaaatc
atgaatgacgagaactcattaacgggtcaatatctgagtgggcgcaagtttattccggta
cgtacggaacgccgtagtgtcggggaccgctggctggaagtgcgtggagcgaaggaaaat
aacctgaaaaacctgaatgtaaaaattccagtgggcgtatttaccgcagtaacaggtgta
tccggctcgggtaaatcgacactaattaatgagattttgtataaaacgctggcacgtgat
ctgaaccgcgcacgggtacgccctggtcagcacaaagagattcgcggtctggaacatatt
gataaagtcattgatattgaccagtcgccaatcggacggacaccacgttccaacccggct
acctatacaggcgtctttgatgacatccgtgatctgtttgcacagaccaatgaagccaaa
gtgcgcggatacaaaaaaggcagatttagtttcaatattaaaggtggtcgttgtgaagca
tgtcgcggggacggcattatcaaaattgagatgcacttcctgccagatgtctacgtgcct
tgtgaggtctgcaaaggcaaacggtacaatcgcgaaacccttgaagtcaaatacaaaaat
agaaatattgcagatgtgctggaaatgacggtagaggatgcaacgcagttcttcgagaac
attccgaaaattcatcgcaaaatgcaaaccttgctcgacgtggggttgggctatattaac
ttgggacagcctgcaacaacgttgtccggtggtgaagcacaacgcgtgaagcttgcttcc
gagctgtatcgtcgcagtacgggtaaaaccatctatattctggacgagccaacgactggt
cttcatgtcgatgatattgatcgtctgctgaacgtcctgcaccgtctggtggattcggga
gaatcggtactggttatcgagcataacctggatgttatcaaaacagccgattatatcgtt
gatctgggtccagaaggtggaagtggtggcggaaccattgttgcgacaggtacgccagag
gatattattaaagtggaagcctcatatacaggtaagtacttgaagcctgtattggagcgg
gatacggaacgaagcaagacgttgcaattgacggagtaa
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